Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq13965 159 9e-35 >seq13965 Length=1093 Score = 159 bits (176), Expect = 9e-35 Identities = 423/630 (67%), Gaps = 26/630 (4%) Strand=Plus/Plus Query 19822 ACCATGGCAACCATCGACCTGTCACAGCTGCCGGCGCCGGCCGTGGTCGAAACGCTCGAC 19881 || ||| |||| || |||||||| |||||||| ||||| | |||| | |||||| Sbjct 291 ACGATGCCAACGATTGACCTGTCGCAGCTGCCATCGCCGCAGATCATCGAGCCACTCGAC 350 Query 19882 TACGAAGCCATCCTGGCCGAGCGGAAAGACTACTTTGTGTCGCTG--TATCCCGCCGACC 19939 | ||| | ||||| | || || ||| | || |||| | | ||| || |||| Sbjct 351 TTCGAGACGATCCTCGTTGA-CGTCAAGGCGGTGATGA-TCGCCGCCTTTCCTGCTGACC 408 Query 19940 AGCGGGACGCCGTGCGCGCCACGCTGGAGCTGGAATCCGAGCCGATCACCAAGCTCTTGC 19999 ||| || | || |||| | ||| |||||| ||||||||| ||| | | || | Sbjct 409 AGCAGGCATCGGTTGCCGCCGCCCTGTCGCTGGAGTCCGAGCCGCTCAACGTGATCGCCC 468 Query 20000 AGGAGAACGCCTACCGCGAGCTGGTGTGGCGCCAGCGCGTGAACGACGCGGCGCGCGGGG 20059 ||| || ||||||||||| || ||| ||||| ||| | ||||| | ||| ||| | Sbjct 469 AGGCGATGGCCTACCGCGAATTGCTGTTGCGCCGGCGAATCAACGAGGGGGC-CGCCGCC 527 Query 20060 T-CATGCTGGCCTTCGCCGAAGGGGAAGACCTGGAGCAGATCGCGGCGAACTTCAACGTG 20118 | ||||||| | ||||||||| |||||||| | | || || ||| || || Sbjct 528 TGCATGCTGAGCCACGCCGAAGGCACCGACCTGGACAACCTGGCCGCCAACCTCGACACC 587 Query 20119 CAGCGCTTGACCATCACGCCGGCTGACGACACCACCGTGCCGCCGACGCCCGCCGTGATG 20178 ||||| |||| ||||| |||| |||| ||| |||| || |||||| Sbjct 588 GAGCGCCTGACGATCACCCCGGAAACGGACA----CGT----CCGA----TGCGGTGATG 635 Query 20179 GAGGGCGACGACTCGCTGCGCGAGCGCGCACAGGAAGCGTTTGAAGGGCTGTCCGTGGCC 20238 || | ||||| | |||||| |||||| || ||||| || || || ||||||| Sbjct 636 GAAAGTGACGAAGCCCTGCGCCTGCGCGCGCAATCCGCGTTCGAGGGCATGAGCGTGGCC 695 Query 20239 GGCCCGACCAAGGCCTACGAGCAGTTCGCGCGCTCGGCTGACGGCCGGGTGGCGGACGCG 20298 |||||| | ||| || || | || | ||| || |||| ||| || ||||| Sbjct 696 GGCCCGTCGGCGGCGTATGAATATTTTACCCGCAGCGCCAGCGGCAAGGTTGCCGACGCC 755 Query 20299 CGCGCGATCAGCCCGGCCGGCGCGGAAGTGGTGGTCTCGGTGCTGTCGCACCTGA--ACG 20356 | || | ||||||||| ||||| |||||| || | | |||||| ||| || || Sbjct 756 AGGGCAACCAGCCCGGCACCGGCGGAGGTGGTGATCGCCATCCTGTCG-ACC-GACGGCG 813 Query 20357 ACGGCA-CGGCAGACGAGAGCCTGCTGGCGACTGT-ACGCACCGCGTTGAGCGATGACGA 20414 |||||| || | | |||| |||||||| | || ||| ||||| | | |||||| || Sbjct 814 ACGGCATCGCCTCGCCAGAG-CTGCTGGCCGCCGTGACG-GCCGCGGTTAACGATGAAGA 871 Query 20415 TACCCGGCCGCTCGGCGACCGTCTGACGGT 20444 ||| ||||| |||||||| ||||||| Sbjct 872 AGTCCGACCGCTGGGCGACCGCGTGACGGT 901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127859686382616