Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_025115.1
Length=40002
Score E
Sequences producing significant alignments: (Bits) Value
seq13965 159 9e-35
>seq13965
Length=1093
Score = 159 bits (176), Expect = 9e-35
Identities = 423/630 (67%), Gaps = 26/630 (4%)
Strand=Plus/Plus
Query 19822 ACCATGGCAACCATCGACCTGTCACAGCTGCCGGCGCCGGCCGTGGTCGAAACGCTCGAC 19881
|| ||| |||| || |||||||| |||||||| ||||| | |||| | ||||||
Sbjct 291 ACGATGCCAACGATTGACCTGTCGCAGCTGCCATCGCCGCAGATCATCGAGCCACTCGAC 350
Query 19882 TACGAAGCCATCCTGGCCGAGCGGAAAGACTACTTTGTGTCGCTG--TATCCCGCCGACC 19939
| ||| | ||||| | || || ||| | || |||| | | ||| || ||||
Sbjct 351 TTCGAGACGATCCTCGTTGA-CGTCAAGGCGGTGATGA-TCGCCGCCTTTCCTGCTGACC 408
Query 19940 AGCGGGACGCCGTGCGCGCCACGCTGGAGCTGGAATCCGAGCCGATCACCAAGCTCTTGC 19999
||| || | || |||| | ||| |||||| ||||||||| ||| | | || |
Sbjct 409 AGCAGGCATCGGTTGCCGCCGCCCTGTCGCTGGAGTCCGAGCCGCTCAACGTGATCGCCC 468
Query 20000 AGGAGAACGCCTACCGCGAGCTGGTGTGGCGCCAGCGCGTGAACGACGCGGCGCGCGGGG 20059
||| || ||||||||||| || ||| ||||| ||| | ||||| | ||| ||| |
Sbjct 469 AGGCGATGGCCTACCGCGAATTGCTGTTGCGCCGGCGAATCAACGAGGGGGC-CGCCGCC 527
Query 20060 T-CATGCTGGCCTTCGCCGAAGGGGAAGACCTGGAGCAGATCGCGGCGAACTTCAACGTG 20118
| ||||||| | ||||||||| |||||||| | | || || ||| || ||
Sbjct 528 TGCATGCTGAGCCACGCCGAAGGCACCGACCTGGACAACCTGGCCGCCAACCTCGACACC 587
Query 20119 CAGCGCTTGACCATCACGCCGGCTGACGACACCACCGTGCCGCCGACGCCCGCCGTGATG 20178
||||| |||| ||||| |||| |||| ||| |||| || ||||||
Sbjct 588 GAGCGCCTGACGATCACCCCGGAAACGGACA----CGT----CCGA----TGCGGTGATG 635
Query 20179 GAGGGCGACGACTCGCTGCGCGAGCGCGCACAGGAAGCGTTTGAAGGGCTGTCCGTGGCC 20238
|| | ||||| | |||||| |||||| || ||||| || || || |||||||
Sbjct 636 GAAAGTGACGAAGCCCTGCGCCTGCGCGCGCAATCCGCGTTCGAGGGCATGAGCGTGGCC 695
Query 20239 GGCCCGACCAAGGCCTACGAGCAGTTCGCGCGCTCGGCTGACGGCCGGGTGGCGGACGCG 20298
|||||| | ||| || || | || | ||| || |||| ||| || |||||
Sbjct 696 GGCCCGTCGGCGGCGTATGAATATTTTACCCGCAGCGCCAGCGGCAAGGTTGCCGACGCC 755
Query 20299 CGCGCGATCAGCCCGGCCGGCGCGGAAGTGGTGGTCTCGGTGCTGTCGCACCTGA--ACG 20356
| || | ||||||||| ||||| |||||| || | | |||||| ||| || ||
Sbjct 756 AGGGCAACCAGCCCGGCACCGGCGGAGGTGGTGATCGCCATCCTGTCG-ACC-GACGGCG 813
Query 20357 ACGGCA-CGGCAGACGAGAGCCTGCTGGCGACTGT-ACGCACCGCGTTGAGCGATGACGA 20414
|||||| || | | |||| |||||||| | || ||| ||||| | | |||||| ||
Sbjct 814 ACGGCATCGCCTCGCCAGAG-CTGCTGGCCGCCGTGACG-GCCGCGGTTAACGATGAAGA 871
Query 20415 TACCCGGCCGCTCGGCGACCGTCTGACGGT 20444
||| ||||| |||||||| |||||||
Sbjct 872 AGTCCGACCGCTGGGCGACCGCGTGACGGT 901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127859686382616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |