Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq57 140 2e-28 seq504 102 5e-17 >seq57 Length=2082711 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | |||||||| | ||| |||||| ||||| |||||||| || Sbjct 1620209 CCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGAC 1620268 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || ||||| || || || ||||| ||||| | ||| |||||| | || Sbjct 1620269 AGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGA 1620328 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | ||||||||| || |||||| ||||| ||| ||| || || || ||| || Sbjct 1620329 ATACCTTCTTTATCTTGAATTTTAGCTTTCA-CATTTTCAATTGTATCAGATGGTTCTAC 1620387 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| ||||| || ||||||||||| || || ||||||||| Sbjct 1620388 TTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCATA 1620436 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | || ||||| || ||| ||| ||||| || |||||||| || Sbjct 1620436 ACCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGA 1620495 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || ||||| || ||||| |||||||| | ||||||||||||| | || Sbjct 1620496 TAGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGG 1620555 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || ||||| | || |||| || | || || | |||| Sbjct 1620556 GATTCCTTCCTTATCCTGGATTTT-GGCTTTTACATTTTCAATAGTATCAGAGGGCTCCA 1620614 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| || || ||||| || || | ||||| ||||| || ||||| Sbjct 1620615 CTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | || ||||| || ||| ||| ||||| || |||||||| || Sbjct 1619068 ACCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGA 1619127 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || ||||| || ||||| |||||||| | ||||||||||||| | || Sbjct 1619128 TAGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGG 1619187 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || ||||| | || ||||| || | || || | || | Sbjct 1619188 GATTCCTTCCTTATCCTGGATTTT-GGCTTTAACATTTTCAATAGTATCAGAGGGCTCAA 1619246 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| || || ||||| || || | ||||| || || || ||||| Sbjct 1619247 CTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | || | |||||||| | ||| ||| || ||||| ||||||||||| Sbjct 1621121 CCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGGAT 1621180 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || ||||| || ||||| |||||||| || || |||||||| | || Sbjct 1621181 AGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGGG 1621240 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || |||||| | | || | || | || || | || || Sbjct 1621241 ATTCCTTCCTTATCTTGAATTTT-AGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAAC 1621299 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || || || || ||||||||||| ||||||||||| Sbjct 1621300 TTCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCAT 1621347 Score = 95.1 bits (104), Expect = 8e-15 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||||| ||| || || || || || ||||| || | ||||| | || |||||||| Sbjct 1618636 ATGTAAAGTTGATTCCTTCTGAATATTATAATCTGACAAGGTGCGACCATCTTCCAATTG 1618695 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| || || |||||||| | ||||| || | || | ||||| ||||| |||||| Sbjct 1618696 TTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCCTTCCTTGTCTTGAATTTT 1618755 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | |||| |||| || | ||||| || ||| || |||| || || ||||| || | Sbjct 1618756 CGCTTTC-ACATTTTCAATAGTGTCAGATGGTTCAACTTCAAGAGTAATGGTTTTTCCAG 1618814 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | || ||||| ||||| || |||||| Sbjct 1618815 TCAAAGTTTTCACAAATATTTGCATA 1618840 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| | || | |||||||| || ||| ||| ||||| || |||||||| || Sbjct 1619524 ACCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGA 1619583 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || || || ||||| |||||||| | ||||||||||||| | || Sbjct 1619584 TAGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGG 1619643 Query 33642 CACACCTTCTTTGTC 33656 | |||||||| || Sbjct 1619644 AATTCCTTCTTTATC 1619658 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||||||||| ||||| || || || ||||| || || ||||| | || || || || Sbjct 1620916 ATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGGCCATCTTCTAACTG 1620975 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 |||||||| || || || | || || ||| |||| | |||||||| || |||||| Sbjct 1620976 CTTTCCGGCGAAGATTAATCTTTGTTGGTCTGGCGGAATTCCTTCTTTATCTTGAATTTT 1621035 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || ||||| || | ||||| | ||| || |||| || |||||||| |||| Sbjct 1621036 AGCCTT-AACATTTTCGATTGTGTCAGAAGGTTCAACTTCAAGTGTAATCGTTTTTCCTG 1621094 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | || || || ||||||||||| Sbjct 1621095 TAAGGGTCTTGACGAAGATCTGCAT 1621119 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| | | || | ||||||||| ||||| || || || ||||| ||| Sbjct 1619297 CCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAG 1619356 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | || |||||||| || || || | || || ||| | || Sbjct 1619357 AGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTGGA 1619416 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || |||||| || ||||| || | ||||| || ||| || Sbjct 1619417 ATTCCTTCTTTATCTTGAATTTTGGCCTT-AACATTTTCGATAGTGTCAGATGGTTCAAC 1619475 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || || || || ||||| | || || ||||||||||||||| Sbjct 1619476 TTCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCATA 1619524 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| | ||| || | ||| ||||| ||||| || || |||||||| || Sbjct 1619981 CCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCAGAA 1620040 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || || ||||| || || |||||||| | ||||| || | || Sbjct 1620041 AGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGTGGT 1620100 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | ||||| || || ||| ||| ||| | ||| ||| ||||| | ||| || Sbjct 1620101 ATTCCTTCCTTATCTTGAATCTTCGCTTTTA-CATTTTCAATTGTGTCAGAAGGTTCTAC 1620159 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || || ||||| | || || || ||||||||||| Sbjct 1620160 TTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCAT 1620207 >seq504 Length=327254 Score = 102 bits (112), Expect = 5e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 |||| || || ||||||||||| || |||||| | || || | ||||| || ||||||| Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||| | ||||||||| | || | |||||||| || || || || | ||||| Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTT-TGCCTTAACATTT 214222 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | ||||| | ||| || |||| || || |||||||| || || ||||| ||| Sbjct 214223 TCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACA 214282 Query 33739 AAGATCTGCATAGTT 33753 || || |||||| || Sbjct 214283 AAAATTTGCATATTT 214297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328637751455040