Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq57 163 7e-35
seq504 86.0 1e-11
>seq57
Length=2082711
Score = 163 bits (180), Expect = 7e-35
Identities = 165/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || |||||||||||||| || | ||||| ||| |||||||
Sbjct 1621116 CAGATCTTCGTCAAGACCCTTACAGGAAAAACGATTACACTTGAAGTTGAACCTTCTGAC 1621057
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| ||||| || ||| || |||||||| |||||||||||| ||| ||| |||
Sbjct 1621056 ACAATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCGCCAGACCAACAA 1620997
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||||||||||||||| |||||||| | ||| | | ||||| || |
Sbjct 1620996 AGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAATATT 1620937
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|||||||| |||||||| || ||||| | |||||
Sbjct 1620936 CAGAAAGAATCTACTCTACATCTTGTACTCAGACT 1620902
Score = 131 bits (144), Expect = 4e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || |||||||| || || || | ||||| ||| ||||||
Sbjct 1619520 CAGATCTTTGTGAAGACTCTTACAGGAAAGACCATTACACTTGAAGTTGAACCATCTGAC 1619461
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| ||||| || ||| || |||||||| |||||||||||| || ||| |||
Sbjct 1619460 ACTATCGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAACAA 1619401
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | |||||||||||||||||| | |||||||| | ||| | | ||||| || ||
Sbjct 1619400 AGGTTAATCTTCGCCGGAAAGCAGCTAGAAGATGGCCGCACTCTCTCAGATTATAATATC 1619341
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|||||||| || ||||| || ||||| | |||||
Sbjct 1619340 CAGAAAGAATCAACTCTACATCTTGTACTCAGACT 1619306
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| ||||| | |||||||||||||| || || ||||| ||| ||||||
Sbjct 1619064 CAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCTGAT 1619005
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | ||| ||||| ||||||||||| || |||||||| || || |||
Sbjct 1619004 ACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAGCAA 1618945
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | || ||||| || || |||||||||||||| | ||| | | ||||| ||| |
Sbjct 1618944 AGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAACATT 1618885
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||||||||| || | || ||||| | |||||||||
Sbjct 1618884 CAGAAAGAGTCAACATTGCATCTTGTCCTTAGACTTCGA 1618846
Score = 123 bits (136), Expect = 6e-23
Identities = 161/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||||||| || || | || ||||| || || || || ||||||||| ||||||
Sbjct 1619976 CAGATATTTGTTAAGACCTTAACTGGAAAGACCATTACCTTAGAAGTGGAACCGTCTGAC 1619917
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| ||| |||||||| |||||||| ||| || || ||
Sbjct 1619916 ACGATAGAAAATGTGAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCACCAGATCAACA 1619858
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
||| | ||||| || || ||||||||||||||||| | ||| || | || ||||| |
Sbjct 1619857 GAGATTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACTCTGTCTGACTACAATAT 1619798
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||||||| |||||| | || ||||| | || ||| ||
Sbjct 1619797 CCAGAAAGAATCTACTTTACATCTTGTACTAAGGCTTAGA 1619758
Score = 123 bits (136), Expect = 6e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || |||||||| || || ||| | ||||| ||| |||||||||| | |||
Sbjct 1620192 AAGACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAACCTTCTGACACAATTGAAAAT 1620133
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
||||| ||||||||||| || |||||||| || ||| ||||| | || |||
Sbjct 1620132 GTAAAAGCGAAGATTCAAGATAAGGAAGGAATACCACCTGACCAGCAAAGGTTGATTTTC 1620073
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || ||||| |||||||| | || | | |||||||| | |||||||| ||
Sbjct 1620072 GCTGGGAAACAGTTAGAAGATGGGCGCACCCTTTCTGATTACAATATTCAGAAAGAATCA 1620013
Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387
|||||||| ||||| || |||||
Sbjct 1620012 ACTCTTCATCTTGTCTTAAGACT 1619990
Score = 123 bits (136), Expect = 6e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || |||||||| || ||| | ||||| || || || ||| | ||
Sbjct 1620876 AAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCAGATACAATAGAGAAC 1620817
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| || || || || |||||||||||| || ||| |||||| | ||||||
Sbjct 1620816 GTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCAACAAAGATTAATCTTC 1620757
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||||| |||||||| | ||| | | ||||| || | |||||||| |||
Sbjct 1620756 GCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAATATTCAGAAAGAATCT 1620697
Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387
||||| || ||||| | |||||
Sbjct 1620696 ACTCTACATCTTGTACTCAGACT 1620674
Score = 120 bits (132), Expect = 7e-22
Identities = 145/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| ||||||| | || |||||||| ||||| || ||||| ||| |||||
Sbjct 1620432 CAGATATTCGTCAAAACGTTAACCGGAAAAACCATCACCTTAGAAGTAGAACCATCTGAT 1620373
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
||| | ||| || ||||| ||| |||||||| |||||||| ||| || || ||
Sbjct 1620372 ACAATTGAAAATGTGAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCACCAGATCAACA 1620314
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| | ||||| || || ||||||||||||||||| | || || | |||||||| |
Sbjct 1620313 GAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACACTGTCTGATTACAATAT 1620254
Query 206352 CCAGAAAGAGTCTAC 206366
||||||||||| ||
Sbjct 1620253 ACAGAAAGAGTCCAC 1620239
Score = 100 bits (110), Expect = 7e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| ||||| | || |||||||| || ||| | ||||| ||| ||||||
Sbjct 1618836 CAAATATTTGTGAAAACTTTGACTGGAAAAACCATTACTCTTGAAGTTGAACCATCTGAC 1618777
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| ||| |||||||| || |||||||| || ||| ||
Sbjct 1618776 ACTATTGAAAATGTGAAAGCGAAA-ATTCAAGACAAGGAAGGAATACCACCTGACCAGCA 1618718
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
||| | || ||||| || || || ||||||||||| | || ||| | ||||| || |
Sbjct 1618717 AAGGTTGATTTTCGCAGGGAAACAATTGGAAGATGGTCGCACCTTGTCAGATTATAATAT 1618658
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || || ||| | || || || |||||
Sbjct 1618657 TCAGAAGGAATCAACTTTACATCTAGTACTGAGA 1618624
Score = 93.3 bits (102), Expect = 1e-13
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814
||||| | ||||| || ||||| || |||||||||| |||||| || | | ||| |
Sbjct 1619306 AGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAGAGAGTGCGG 1619365
Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||| |||||||||||||||||||| | || ||||||
Sbjct 1619366 CCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTG 1619406
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || |||||||| || ||| | ||||| || ||||| ||| | ||
Sbjct 1619736 AAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCTGATACAATAGAGAAC 1619677
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| || || || || |||||||||||| || || || | ||||| ||
Sbjct 1619676 GTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCAGCAGCGTCTTATTTTT 1619617
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| ||||||||||| |||||||| | ||| | | |||||||| | || || |||||
Sbjct 1619616 GCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAATATTCAAAAGGAGTCC 1619557
Query 206365 ACTCTTCA 206372
|| |||||
Sbjct 1619556 ACCCTTCA 1619549
Score = 91.5 bits (100), Expect = 3e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || |||||||| || ||| | |||||||| ||||| || | |||
Sbjct 1620648 AAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTCTGATACTATTGAAAAT 1620589
Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
||||| || ||| || || || || |||||||| || || || | ||||| ||
Sbjct 1620588 GTAAAAGCCAAA-ATCCAGGATAAGGAAGGAATCCCACCAGATCAGCAGCGTCTTATTTT 1620530
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| |||||||||||||||||||| | ||| | | |||||||| | || || |||||
Sbjct 1620529 TGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAATATTCAAAAGGAGTC 1620470
Query 206364 TACTCTTCA 206372
|| |||||
Sbjct 1620469 CACCCTTCA 1620461
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || |||||||| || ||| | ||||| || ||||| || | |||
Sbjct 1619280 AAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTCTGATACTATTGAAAAT 1619221
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| || || || || |||||||| || || || | ||||| ||
Sbjct 1619220 GTTAAAGCCAAA-ATCCAGGATAAGGAAGGAATCCCACCAGATCAGCAGCGTCTTATTTT 1619162
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| |||||||||||||||||||| | ||| | | |||||||| | || || |||||
Sbjct 1619161 TGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAATATTCAAAAGGAGTC 1619102
Query 206364 TACTCTTCA 206372
|| |||||
Sbjct 1619101 CACCCTTCA 1619093
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|||||| | || || || || || ||| | ||||| || ||| || || | |||
Sbjct 1621332 AAAACGTTGACGGGGAAGACAATAACTCTTGAAGTTGAGCCTTCAGATACTATTGAAAAC 1621273
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| || |||||||| || |||||||| || || ||| || | || ||
Sbjct 1621272 GTAAAGGCTAAAATTCAAGATAAGGAAGGAATCCCTCCTGATCAGCAACGATTAATTTTT 1621213
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| |||||||||||||||||||| | || | |||||||||| | ||||| |||||
Sbjct 1621212 GCTGGAAAGCAGTTGGAAGATGGTCGTACCCTATCCGATTACAATATACAGAAGGAGTCC 1621153
Query 206365 AC 206366
||
Sbjct 1621152 AC 1621151
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814
||||| | ||||| || |||||||| |||||||| | |||||| || | | ||| |
Sbjct 1620674 AGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGG 1620733
Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||| | |||||||||||||||||| | | ||||||
Sbjct 1620734 CCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTG 1620774
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814
||||| | ||||| || |||||||| |||||||| | |||||| || | | ||| |
Sbjct 1620902 AGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGG 1620961
Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||| | |||||||||||||||||| | | ||||||
Sbjct 1620962 CCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTG 1621002
>seq504
Length=327254
Score = 86.0 bits (94), Expect = 1e-11
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || ||||| || || | || || ||| || |||||| | |||
Sbjct 214278 AAAACTTTGACGGGTAAAACAATTACCCTTGAGGTTGAACCCTCAGACACAATTGAAAAT 214219
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||| ||||| |||||||||||| || || |||||| | || ||
Sbjct 214218 GTTAAGGCAAAGATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAAAGATTGATTTTT 214159
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAG 206359
|| || || ||| | ||||||||| | || | |||||||||| |||||||||
Sbjct 214158 GCTGGCAAACAGCTAGAAGATGGACGCACCCTTTCCGATTACAATATCCAGAAAG 214104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181570395439577
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |