Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq57 163 7e-35 seq504 86.0 1e-11 >seq57 Length=2082711 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || |||||||||||||| || | ||||| ||| ||||||| Sbjct 1621116 CAGATCTTCGTCAAGACCCTTACAGGAAAAACGATTACACTTGAAGTTGAACCTTCTGAC 1621057 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| ||||| || ||| || |||||||| |||||||||||| ||| ||| ||| Sbjct 1621056 ACAATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCGCCAGACCAACAA 1620997 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | |||||||||||||||||||| |||||||| | ||| | | ||||| || | Sbjct 1620996 AGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAATATT 1620937 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||||| |||||||| || ||||| | ||||| Sbjct 1620936 CAGAAAGAATCTACTCTACATCTTGTACTCAGACT 1620902 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || |||||||| || || || | ||||| ||| |||||| Sbjct 1619520 CAGATCTTTGTGAAGACTCTTACAGGAAAGACCATTACACTTGAAGTTGAACCATCTGAC 1619461 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| || |||||||| |||||||||||| || ||| ||| Sbjct 1619460 ACTATCGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAACAA 1619401 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||||||||||||| | |||||||| | ||| | | ||||| || || Sbjct 1619400 AGGTTAATCTTCGCCGGAAAGCAGCTAGAAGATGGCCGCACTCTCTCAGATTATAATATC 1619341 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||||| || ||||| || ||||| | ||||| Sbjct 1619340 CAGAAAGAATCAACTCTACATCTTGTACTCAGACT 1619306 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| ||||| | |||||||||||||| || || ||||| ||| |||||| Sbjct 1619064 CAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCTGAT 1619005 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| ||||| ||||||||||| || |||||||| || || ||| Sbjct 1619004 ACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAGCAA 1618945 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || ||||| || || |||||||||||||| | ||| | | ||||| ||| | Sbjct 1618944 AGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAACATT 1618885 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || | || ||||| | ||||||||| Sbjct 1618884 CAGAAAGAGTCAACATTGCATCTTGTCCTTAGACTTCGA 1618846 Score = 123 bits (136), Expect = 6e-23 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || | || ||||| || || || || ||||||||| |||||| Sbjct 1619976 CAGATATTTGTTAAGACCTTAACTGGAAAGACCATTACCTTAGAAGTGGAACCGTCTGAC 1619917 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| |||||||| ||| || || || Sbjct 1619916 ACGATAGAAAATGTGAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCACCAGATCAACA 1619858 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||| || || ||||||||||||||||| | ||| || | || ||||| | Sbjct 1619857 GAGATTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACTCTGTCTGACTACAATAT 1619798 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||| |||||| | || ||||| | || ||| || Sbjct 1619797 CCAGAAAGAATCTACTTTACATCTTGTACTAAGGCTTAGA 1619758 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || |||||||| || || ||| | ||||| ||| |||||||||| | ||| Sbjct 1620192 AAGACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAACCTTCTGACACAATTGAAAAT 1620133 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| ||||||||||| || |||||||| || ||| ||||| | || ||| Sbjct 1620132 GTAAAAGCGAAGATTCAAGATAAGGAAGGAATACCACCTGACCAGCAAAGGTTGATTTTC 1620073 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||||| |||||||| | || | | |||||||| | |||||||| || Sbjct 1620072 GCTGGGAAACAGTTAGAAGATGGGCGCACCCTTTCTGATTACAATATTCAGAAAGAATCA 1620013 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 |||||||| ||||| || ||||| Sbjct 1620012 ACTCTTCATCTTGTCTTAAGACT 1619990 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||| | ||||| || || || ||| | || Sbjct 1620876 AAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCAGATACAATAGAGAAC 1620817 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || || || || |||||||||||| || ||| |||||| | |||||| Sbjct 1620816 GTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCAACAAAGATTAATCTTC 1620757 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||||| |||||||| | ||| | | ||||| || | |||||||| ||| Sbjct 1620756 GCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAATATTCAGAAAGAATCT 1620697 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||||| || ||||| | ||||| Sbjct 1620696 ACTCTACATCTTGTACTCAGACT 1620674 Score = 120 bits (132), Expect = 7e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| ||||||| | || |||||||| ||||| || ||||| ||| ||||| Sbjct 1620432 CAGATATTCGTCAAAACGTTAACCGGAAAAACCATCACCTTAGAAGTAGAACCATCTGAT 1620373 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| || ||||| ||| |||||||| |||||||| ||| || || || Sbjct 1620372 ACAATTGAAAATGTGAAAGCTAAA-ATTCAAGATAAAGAAGGTATTCCACCAGATCAACA 1620314 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | ||||| || || ||||||||||||||||| | || || | |||||||| | Sbjct 1620313 GAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACACTGTCTGATTACAATAT 1620254 Query 206352 CCAGAAAGAGTCTAC 206366 ||||||||||| || Sbjct 1620253 ACAGAAAGAGTCCAC 1620239 Score = 100 bits (110), Expect = 7e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| | || |||||||| || ||| | ||||| ||| |||||| Sbjct 1618836 CAAATATTTGTGAAAACTTTGACTGGAAAAACCATTACTCTTGAAGTTGAACCATCTGAC 1618777 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| |||||||| || |||||||| || ||| || Sbjct 1618776 ACTATTGAAAATGTGAAAGCGAAA-ATTCAAGACAAGGAAGGAATACCACCTGACCAGCA 1618718 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | || ||||| || || || ||||||||||| | || ||| | ||||| || | Sbjct 1618717 AAGGTTGATTTTCGCAGGGAAACAATTGGAAGATGGTCGCACCTTGTCAGATTATAATAT 1618658 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| || || ||| | || || || ||||| Sbjct 1618657 TCAGAAGGAATCAACTTTACATCTAGTACTGAGA 1618624 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||| | ||||| || ||||| || |||||||||| |||||| || | | ||| | Sbjct 1619306 AGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAGAGAGTGCGG 1619365 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| |||||||||||||||||||| | || |||||| Sbjct 1619366 CCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTG 1619406 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||| | ||||| || ||||| ||| | || Sbjct 1619736 AAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCTGATACAATAGAGAAC 1619677 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || || || || |||||||||||| || || || | ||||| || Sbjct 1619676 GTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCAGCAGCGTCTTATTTTT 1619617 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||||| |||||||| | ||| | | |||||||| | || || ||||| Sbjct 1619616 GCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAATATTCAAAAGGAGTCC 1619557 Query 206365 ACTCTTCA 206372 || ||||| Sbjct 1619556 ACCCTTCA 1619549 Score = 91.5 bits (100), Expect = 3e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||| | |||||||| ||||| || | ||| Sbjct 1620648 AAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTCTGATACTATTGAAAAT 1620589 Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| || ||| || || || || |||||||| || || || | ||||| || Sbjct 1620588 GTAAAAGCCAAA-ATCCAGGATAAGGAAGGAATCCCACCAGATCAGCAGCGTCTTATTTT 1620530 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || |||||||||||||||||||| | ||| | | |||||||| | || || ||||| Sbjct 1620529 TGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAATATTCAAAAGGAGTC 1620470 Query 206364 TACTCTTCA 206372 || ||||| Sbjct 1620469 CACCCTTCA 1620461 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || |||||||| || ||| | ||||| || ||||| || | ||| Sbjct 1619280 AAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTCTGATACTATTGAAAAT 1619221 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || || || || |||||||| || || || | ||||| || Sbjct 1619220 GTTAAAGCCAAA-ATCCAGGATAAGGAAGGAATCCCACCAGATCAGCAGCGTCTTATTTT 1619162 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || |||||||||||||||||||| | ||| | | |||||||| | || || ||||| Sbjct 1619161 TGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAATATTCAAAAGGAGTC 1619102 Query 206364 TACTCTTCA 206372 || ||||| Sbjct 1619101 CACCCTTCA 1619093 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 |||||| | || || || || || ||| | ||||| || ||| || || | ||| Sbjct 1621332 AAAACGTTGACGGGGAAGACAATAACTCTTGAAGTTGAGCCTTCAGATACTATTGAAAAC 1621273 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| || |||||||| || |||||||| || || ||| || | || || Sbjct 1621272 GTAAAGGCTAAAATTCAAGATAAGGAAGGAATCCCTCCTGATCAGCAACGATTAATTTTT 1621213 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||||||||||||||| | || | |||||||||| | ||||| ||||| Sbjct 1621212 GCTGGAAAGCAGTTGGAAGATGGTCGTACCCTATCCGATTACAATATACAGAAGGAGTCC 1621153 Query 206365 AC 206366 || Sbjct 1621152 AC 1621151 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||| | ||||| || |||||||| |||||||| | |||||| || | | ||| | Sbjct 1620674 AGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGG 1620733 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| | |||||||||||||||||| | | |||||| Sbjct 1620734 CCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTG 1620774 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||| | ||||| || |||||||| |||||||| | |||||| || | | ||| | Sbjct 1620902 AGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGG 1620961 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| | |||||||||||||||||| | | |||||| Sbjct 1620962 CCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTG 1621002 >seq504 Length=327254 Score = 86.0 bits (94), Expect = 1e-11 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || || | || || ||| || |||||| | ||| Sbjct 214278 AAAACTTTGACGGGTAAAACAATTACCCTTGAGGTTGAACCCTCAGACACAATTGAAAAT 214219 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| ||||| |||||||||||| || || |||||| | || || Sbjct 214218 GTTAAGGCAAAGATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAAAGATTGATTTTT 214159 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAG 206359 || || || ||| | ||||||||| | || | |||||||||| ||||||||| Sbjct 214158 GCTGGCAAACAGCTAGAAGATGGACGCACCCTTTCCGATTACAATATCCAGAAAG 214104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181570395439577