Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq2248 140 4e-28 >seq2248 Length=16282 Score = 140 bits (154), Expect = 4e-28 Identities = 294/436 (67%), Gaps = 8/436 (2%) Strand=Plus/Minus Query 42333 ATTGCGATTGGGAATGGTTGCGCGACGAAATCAAAAAATATGGCTTGCGTAACTCAACTC 42392 ||| |||||||||| |||||||| ||||||| | | || |||||||||| || | Sbjct 518 ATTACGATTGGGAAGCACTGCGCGACAGTATCAAAACACACGGTCTGCGTAACTCCACGC 459 Query 42393 TTTCCGCTTTAATGCCATGTGAGAGTAGTTCTCAAGTAAGCAACTCAACAAACGGGATTG 42452 | || || || ||||| | || | || ||| | |||| | || ||||| || | Sbjct 458 TCTCTGCGTTGATGCCGTCGGAAACCTCGTCACAAATTTCCAACGCCACCAACGGTATCG 399 Query 42453 AACCGCCTCGCGGTCCTGTGAGTGTGAAATCTTCGAAAGAAGGTTCATTCAACCAGGTAG 42512 |||| || ||||||| | ||| | || | || ||||| || || |||||| | Sbjct 398 AACCACCACGCGGTCACATCAGTATCAAGGCGTCAAAAGACGGCATTTTGCGCCAGGTGG 339 Query 42513 TACCGAACCAGAACGATCAGATTGATTTCTATGATTATCTCTGGACAATGGCAAAACGCG 42572 | ||| | | || | || ||| ||| || | || ||| |||| | || Sbjct 338 TGCCGGATTACAAAACCCTGAAGGATGCCTACGAATTACTGTGGGAAATGCCGAAC---- 283 Query 42573 GTAATAAAGGTTATCTGTCTCATGTTGCTGTTATGCAGAAGTTTGTTGATCAAGCGATCT 42632 ||| | || || ||| | |||| | |||||||||||||| ||||| || || | Sbjct 282 --AATGACGGCTACCTGCAACTGGTTGGGCTGATGCAGAAGTTTGTCGATCAGGCTATTT 225 Query 42633 CTGCAAACACCAACTATGATCCGGCTAACTTCCCAGATGGTAAAGTGAAATCTGAAACCA 42692 |||| ||||||||||| |||||||| |||||| || |||||| |||||| Sbjct 224 CTGCCAACACCAACTACGATCCGGCGCGCTTCCCGTCAGGAAAAGTG-CCGATGAAACAG 166 Query 42693 TCATTGA-TGACCTGCTTTATGCGAACTACTACGGCGTGAAAACTCTGTATTATCACAAC 42751 | ||| |||| ||||| || | | | ||| ||||||| ||||||||||| ||| Sbjct 165 TTGCTGACTGACTTGCTTACCGCCTATAAGTTCGGGTTGAAAACGCTGTATTATCAAAAC 106 Query 42752 ACCCGCGACGGTGCAG 42767 ||||| |||||||||| Sbjct 105 ACCCGTGACGGTGCAG 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569901369906120