Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq3504 122 9e-23 >seq3504 Length=7869 Score = 122 bits (134), Expect = 9e-23 Identities = 163/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 142227 CGGAACGAAAGCAATCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCT 142286 |||||| | | || ||||| || |||||||||||||||||| | || ||||| || Sbjct 7517 CGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAGACGGTTTTCCGCT 7576 Query 142287 TCTCTCCACGAAGAAGCTG-CATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCA 142345 | |||| ||| |||| |||||| || ||||| ||| || |||||||||||| Sbjct 7577 GGTGACCACCAAG-CGCTGCCATCTGCGCTCAATCATTCACGAGCTGTTGTGGTTCCTCA 7635 Query 142346 AAGGCGATACGAACATCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGG 142405 | || || || ||| | ||||| ||||| | || || | || ||||||||||||| Sbjct 7636 ACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATTTGGGATGAATGGG 7695 Query 142406 CTGATGCCAATGGCAACCTCGGACCTGTCTACGGCAAGCAGTGG 142449 | |||| |||||| | || || || || ||||| ||||||||| Sbjct 7696 CCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGG 7739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500395740559120