Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_025434.1
Length=62699
Score E
Sequences producing significant alignments: (Bits) Value
seq3892 179 1e-40
seq3409 174 6e-39
seq1209 131 7e-26
seq1599 125 3e-24
seq4809 123 1e-23
seq5862 122 3e-23
seq1653 122 3e-23
seq1577 118 4e-22
>seq3892
Length=6556
Score = 179 bits (198), Expect = 1e-40
Identities = 225/307 (73%), Gaps = 4/307 (1%)
Strand=Plus/Minus
Query 61415 TTCTTTTCGCACTCGATGAAGTATCGGCGTATCTGGCGGCCTTTTTCGTTACGTTCAACC 61474
||||| || || ||||||||||| || || | ||| ||||||| ||||| || ||||||
Sbjct 3490 TTCTTCTCACATTCGATGAAGTAGCGTCGCACCTGACGGCCTTGCTCGTTGCGCTCAACC 3431
Query 61475 ATCGCAAGCTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGCGGCGGCCTGGA 61534
||||| || ||||| || |||||||||||||| ||||| ||||| | ||| || || |
Sbjct 3430 ATCGCCAGTTCTTTAGCAGTGTCGAGGGTGAGCTGGTAGTCCTTTCTGCGACGCCCGACA 3371
Query 61535 GTTTTCGCCAAATTTGGCGAAAATAGAATGTAGTCTAAATTTTCTACGAATCCATACTCG 61594
||||||||| ||| ||||||||||| |||||||||| |||| | || || |||||
Sbjct 3370 GTTTTCGCCGAATCTGGCGAAAATACGATGTAGTCTAGATTTGCGGTAAACCCGTACTC- 3312
Query 61595 TTTAGCTTGG--CCCGTATCCAGTTAGAAAAATCTTTACCTACCTCTAAAAATCCATGCA 61652
| | || | | || |||||||| ||||| || ||||| | ||||| ||| |
Sbjct 3311 -TGAAATTCGCTCACGAATCCAGTTGGAAAAGTCGCGGCCTACATTCAAAAAAGTATGAA 3253
Query 61653 AATCACGCGCGTTCACCAGAAGCGTAGGTTCATTTGAGATTGTACCTTCAAACACAGGGA 61712
||| || || || ||||| | | || |||| || || || | ||| |||||||
Sbjct 3252 GATCGCGAGCATTACAAAGAAGAATGGAATCGTTTGCAATGGTGCCATTAAAAACAGGGA 3193
Query 61713 TGAGTTG 61719
|||| ||
Sbjct 3192 TGAGCTG 3186
>seq3409
Length=8325
Score = 174 bits (192), Expect = 6e-39
Identities = 318/463 (69%), Gaps = 2/463 (0%)
Strand=Plus/Plus
Query 25510 CTGGCGCTGATTGCCGCAGGGGCTTCTGCGCCTGAAATCCTGGATCAGTTTCTGGATGAA 25569
|||||||| || || || || | |||| || | || ||| || || | | ||||
Sbjct 2951 CTGGCGCTCATCGCTGCTGGCGTGACTGCTCCCGTGATGATGGCGCAATTCCAGACTGAA 3010
Query 25570 AAAGAAGGTAACCACACCACGGCATACCGTGATGGTGCGGGGATCTGGACCATCTGCCGT 25629
||||| || | | | | || || | ||| || | || |||||||| || ||| ||
Sbjct 3011 AAAGAGGGGATGCGTATAAACGCTTATCCTGACGGCGGCGGCATCTGGACGATTTGCGGT 3070
Query 25630 GGAGCCACCCGGGTGGATGGTAAGCCTGTGATTCCTGGCATGAAGCTGTCGAAGGAAAAA 25689
|| | || ||||| ||||| ||||| || | |||||||||||| | | |
Sbjct 3071 GGCGTGACACGGGTAGATGGCAAGCCGGTAGTGAAGGGCATGAAGCTGACCGCCGGGCAG 3130
Query 25690 TGCGACCGGGTTAACGCTATCGAACGGGATAAGGCGCTGGCATGGGTGGAGAAAAACATC 25749
|| | | || | || |||| | | |||||||| | |||||||| ||| |
Sbjct 3131 TGTGCAAAGATTGATGCCGCAGAACAGCAAAAGGCGCTCGATTGGGTGGATCGCAACGTT 3190
Query 25750 AAAGTGCCACTGACTGAACCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAACATT 25809
|||||||| || ||||| | ||||||| || ||||| ||||| ||||| | || ||
Sbjct 3191 AAAGTGCCGCTCACTGAGACTCAGAAAGTCGGCATTGCCTCATTTTGTCCGTGGAATATC 3250
Query 25810 GGCCCGGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAATT-AATGCAGGAGATCGAAA 25868
|| || ||||| || ||| | || ||||| || | |||| ||||| || |||| |
Sbjct 3251 GGTCCCGGTAACTGCTTCACCTCAACGTTCTACCG-CAAATTGAATGCCGGCGATCTCAT 3309
Query 25869 AGGTGCCTGCGAAGCGATTCGCTGGTGGATTAAGGACGGTGGCAGGGACTGCCGTATTCG 25928
||||||||| ||| |||| | |||||| |||||| |||| || |||||||| ||
Sbjct 3310 TGGTGCCTGCAAAGAGATTAAGCGCTGGATTTGGGACGGAGGCAAAGATTGCCGTATCCG 3369
Query 25929 CTCAAATAACTGTTATGGTCAGGTATCCCGTCGTGACCAGGAG 25971
| | ||||||||||| || ||| || | || ||||||||||||
Sbjct 3370 CGCCAATAACTGTTACGGGCAGATAGCGCGGCGTGACCAGGAG 3412
Score = 141 bits (156), Expect = 4e-29
Identities = 189/260 (73%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 26498 CGTAAACTTGCTGGCTGGCTTCAGACTATCAGCCCAAATAAGGTTAAGCTCAAAATCCGA 26557
|| ||| | |||| |||||| | |||| || ||||| ||||||| ||| ||
Sbjct 5332 CGCAAATTGGCTGCCTGGCTGGCCAGTATCCAGCCGAATAAAGTTAAGCCAGAAAGTCGC 5391
Query 26558 GACAAGGTGATCCAGTATCAGGAAGAGTGCGACGATGTTCTCTATGAATACTGGACGAAG 26617
||||| ||| | ||||||||||| |||||||| || || ||||||||||||||||| ||
Sbjct 5392 GACAAAGTGGTTCAGTATCAGGAGGAGTGCGATGACGTGCTCTATGAATACTGGACAAAA 5451
Query 26618 GGTTTTGTCGTTAATCCCCGTCGAATG-AGTGTGATGGAAGAACTCAATCAGGCTTGCGC 26676
||| || |||||||| | | | || || ||| | ||||||||| ||||||||
Sbjct 5452 GGTCAGGTTACCAATCCCCG-CAAGCGCAGCGTCATGCAGGAACTCAATGCCGCTTGCGC 5510
Query 26677 TGACATGAAACGGGATAAAAACATTGCCAGTGTGTTTGCTACCGGGCTGAATGAGTGGAA 26736
||| | ||| ||| ||| | ||||||| ||||||| || || |||| ||||||||
Sbjct 5511 CGACTTAAAAACGGACAAAGCCGTTGCCAGCGTGTTTGGCACGGGATTGAACGAGTGGAA 5570
Query 26737 ACAGGTTAAAGCCGCGCATG 26756
| |||| || || ||||
Sbjct 5571 AGGCATTAAGGCGGCACATG 5590
>seq1209
Length=44547
Score = 131 bits (144), Expect = 7e-26
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 8665 GATGGCGTAGAGTTTGCCGTCAACAATACGTTTGTTGTTTGTGTCTACTGCGATTGTTGT 8724
||||||||||| ||||| |||| |||||| || | ||| |||| || |||| || ||
Sbjct 6743 GATGGCGTAGATCTTGCCATCAATAATACGCTTATCGTTGGTGTTGACGGCGACGGTGGT 6684
Query 8725 TCCATCTGGTATCACGGGTTCCATGCTATCACCAGTAGCCGGAAAACAAAGCACACCAGA 8784
||||| || || | ||||||||||| || || | ||||| ||||| || || || ||
Sbjct 6683 GCCATCGGGAATAAATGGTTCCATGCTGTCGCCCTTGGCCGGGAAACAGAGTACGCCGGA 6624
Query 8785 ACCATCACTGTTAGCTCCGACACGGCGCAAGGTTGCTTTTGAGAAGCGTAATTTAAAACC 8844
||||| || || ||||| ||||| ||||| | ||| || || || || ||||| ||
Sbjct 6623 GCCATCGGAATTCGCACCGACGCGGCGTAAGGTCGATTTGGAAAACCGCAACTTAAACCC 6564
Query 8845 ATTATGATCTTC 8856
|||||||||||
Sbjct 6563 GTTATGATCTTC 6552
>seq1599
Length=30855
Score = 125 bits (138), Expect = 3e-24
Identities = 136/178 (76%), Gaps = 2/178 (1%)
Strand=Plus/Minus
Query 61417 CTTTTCGCACTCGATGAAGTATCGGCGTATCTGGCGGCCTTTTTCGTTACGTTCAACCAT 61476
|||||| ||||| |||||||| ||||| | ||| |||||||| ||||| | || |||||
Sbjct 20322 CTTTTCACACTCAATGAAGTAACGGCGAACCTGACGGCCTTTGTCGTTGTGCTCCACCAT 20263
Query 61477 CGCAAGCTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGCGGCGGCCTGGAGT 61536
|| || |||||||||||||| |||||||||||||| ||||| | || || || ||
Sbjct 20262 TGCCAGTTCTTTGGCTGTGTCCAGGGTGAGGTGGTAGTCCTTTCTGCCTCGTCCGTGACC 20203
Query 61537 TTTCGCCAAATTTGGCGAAAATAG-AATGTAGTCTAAATTTTCTACGAATCCATACTC 61593
| | || ||| | | |||||| |||||||| |||||| ||||| ||| ||||
Sbjct 20202 TATTTCCCGATTCTG-GGAAATAGCTATGTAGTCCTGATTTTCAACGAAACCAAACTC 20146
>seq4809
Length=3389
Score = 123 bits (136), Expect = 1e-23
Identities = 215/305 (70%), Gaps = 17/305 (6%)
Strand=Plus/Plus
Query 17087 AATATACCTGTGGTGACTACAGAGCTTCTTGCC-AGCTTATATGGCACAGAACCAGATTA 17145
||||| ||||| | ||||| |||||| | || ||||| || |||||||| |||| |
Sbjct 822 AATATTCCTGTTATTACTACTGAGCTTTTAGCTGAGCTT-TACGGCACAGAGCCAGTTAG 880
Query 17146 CATCCGAAAAAATTTCAATCGGAATTCTGGACGATTTGTTATCGGTAAGCACTACTTTTT 17205
||||| |||||| ||| || ||| ||| || || ||| || ||||| |||||
Sbjct 881 AATCCGCAAAAATCACAACCGTAATGCTGATCGGTTCGTTGATGGCAAGCA----TTTTT 936
Query 17206 ACTTGAGAATGAGGAGTTGC---GCGAATTTAAGCACAGCATGTCTTTAAGACCTTCTGT 17262
|| | || | | | | | ||||| || || |||||||||||| | ||
Sbjct 937 ACAAAACAACCGGAACTGACCTTGATAATTTGAG---AG--TGTCTTTAAGACACT-TGC 990
Query 17263 GAAAATCGCCCGTAACGTTCGCTCCCTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCA 17322
|| ||| ||| ||| |||| ||||| ||||||||||| |||||||| || | ||
Sbjct 991 AAATATCACCCAAAAC--TCGCAGTCTCATTCTCTGGACAGAGCGCGGAGCCGCTAGGCA 1048
Query 17323 CGCAAAAATGCTCGAAACTGATCAGGCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTA 17382
|| || ||||||||||| ||||| | ||||||||| ||||| | ||| |||| || ||
Sbjct 1049 TGCCAAGATGCTCGAAACCGATCAAGAATGGGAAGTATTCGAGCAGCTGAAAGATTGTTA 1108
Query 17383 TTTCA 17387
||||
Sbjct 1109 CTTCA 1113
>seq5862
Length=3465
Score = 122 bits (134), Expect = 3e-23
Identities = 211/304 (69%), Gaps = 12/304 (4%)
Strand=Plus/Plus
Query 17087 AATATACCTGTGGTGACTACAGAGCTTCTTGCCAGCTTATATGGCACAGAACCAGATTAC 17146
|| ||||| || | ||||| ||| | || || | ||| ||||| | ||| | |
Sbjct 1732 AACATACCGGTTATTACTACTGAGTTACTGGCTAACTTGTATGGTGCCGAAGTGAACAGC 1791
Query 17147 ATCCGAAAAAATTTCAATCGGAATTCTGGACGATTTGTTATCGGTAAGCACTACTTTTTA 17206
|||| | |||||||||| || ||| | | |||| ||| |||||||| ||||| |
Sbjct 1792 ATCCAACAAAATTTCAAGCGCAATGTGGAAAGATTCATTAATGGTAAGCAT--CTTTTCA 1849
Query 17207 --CTTGAGAATGAGGAGTTGCGCGAATTTAAGCACAGCATGTCTTTAAGACCTTCTGT-G 17263
|| || || ||| | | |||| ||| |||| || | ||| | || || |
Sbjct 1850 AGCTGGAAGGGGATGAGCTTAGGGAATACAAGAACAGGCTGACAGAAAGTCAGTCAGTTG 1909
Query 17264 AAAATCGCCCGTAACGTTCGCTCCCTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCAC 17323
||| | | || ||| ||||||||| |||||||| ||||||||||| | |||
Sbjct 1910 CAAAACACACG-------CGCAGCCTCATCCTTTGGACAGAGCGCGGAGCAGCAAGACAC 1962
Query 17324 GCAAAAATGCTCGAAACTGATCAGGCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTAT 17383
|| || |||||||| || ||| ||||||||||||| ||||| |||||||||| |||||
Sbjct 1963 GCCAAGATGCTCGAGACAGATAAGGCATGGGAAGTATTCGAGCAACTGGAAGATTGCTAC 2022
Query 17384 TTCA 17387
||||
Sbjct 2023 TTCA 2026
>seq1653
Length=29478
Score = 122 bits (134), Expect = 3e-23
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 91 CAAATTTGGGACATCGTCACTCAATATGTCGTCAATTTTCCTCGCGTGCTCTGTCAAATG 150
|| ||| | ||||||| | ||| | ||||||||||| || || || || || || ||
Sbjct 586 CAGATTAGTGACATCGCCCGCCAAGACTTCGTCAATTTTTCTGGCATGTTCGGTTAAGTG 527
Query 151 ATTAGGTGCAAGGTGTGCGTACCTACGCACCATTTCGATAGACTCCCAGCCGCCCATTTC 210
| |||| | || ||||| | | ||||| |||||| ||||||||| ||||||||
Sbjct 526 AACCGGTGATAAATGAGCGTAACGTTGTACCATCTCGATACTCTCCCAGCCCCCCATTTC 467
Query 211 CTGAAGTACTGACAGCGGTACACCTGACTGAATTAACCAACTGGCCCAAGTGTGGCGGAG 270
|| | | | ||||| || || |||||||||| ||||||||| ||||| || || || ||
Sbjct 466 TTGCAATGCAGACAGGGGCACGCCTGACTGAACTAACCAACTTGCCCAGGTATGTCGCAG 407
Query 271 GTCATGAAAACGGAA 285
|||||||| | |||
Sbjct 406 ATCATGAAATCTGAA 392
>seq1577
Length=31499
Score = 118 bits (130), Expect = 4e-22
Identities = 227/329 (69%), Gaps = 18/329 (5%)
Strand=Plus/Plus
Query 61415 TTCTTTTCGCACTCGATGAAGTATCGGCGTATCTGGCGGCCTTTTTCGTTACGTTCAACC 61474
||||| || || ||||||||||| || || | ||| ||||||| ||||| || ||||||
Sbjct 21929 TTCTTCTCACATTCGATGAAGTAGCGTCGCACCTGACGGCCTTGCTCGTTGCGCTCAACC 21988
Query 61475 ATCGCAAGCTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGC------GGCGG 61528
||||| |||||||| ||||||| |||||||| ||||| ||||||| | |
Sbjct 21989 ATCGCCAGCTCTTTTGCTGTGTTCAGGGTGAGATGGTAGTCCTTGCTTCTTCTATCTCCA 22048
Query 61529 CCTGGAGT-------TTTCGCCAAATTTGGCGAAAATAGAATGTAGTCTAAATTTTCTAC 61581
||| | || ||| || | |||| | || | ||||||||| ||||| |
Sbjct 22049 CCTCGTGTATTTTTGATTCCCCCACTTTGATG-AACCAAAATGTAGTCCGCGTTTTCGAT 22107
Query 61582 GAATCCATACTCGTTTAGCTTGGCCCGT-ATCCAGTTAGAAAAATCTTTACCTACCTCTA 61640
|||||| |||||| || | || | | ||||| | |||||||| | || || |
Sbjct 22108 GAATCCGTACTCG-GTAACGCGGTTCTTAATCCATGTTGAAAAATCACGGCGAACATCGA 22166
Query 61641 AAAATCCATGCAAATCACGCGCGTTCAC-CAGAAGCGTAGGTTCATTTGAGATTGTACCT 61699
||| |||||| | |||||| |||| ||| || || | ||| || || || || ||
Sbjct 22167 GGAATTCATGCAGCTTACGCGC-ATCACACAGTAGAGTTGCTTCGTTGGAAATAGTGCCG 22225
Query 61700 TCAAACACAGGGATGAGTTGAGTGGTCAT 61728
| || || ||||| || ||| |||||||
Sbjct 22226 TTGAAAACGGGGATAAGCTGATTGGTCAT 22254
Score = 84.2 bits (92), Expect = 9e-12
Identities = 107/143 (75%), Gaps = 7/143 (5%)
Strand=Plus/Minus
Query 16824 ATACTCTGCGTCAGGTGCTCAAAACACCTTAGCAAGTAGCGGTTACCGCGCCCGACAGAC 16883
||| || || |||||||| |||||||||| | ||||||| ||||| ||||||||||
Sbjct 22461 ATAGTCCGCTACAGGTGCTGAAAACACCTTTTC--GTAGCGGAAACCGCACCCGACAGAC 22404
Query 16884 ATGCGGttttttttGTGTCCAGTCTTCTTGGTTTATGACCGGGCGTGCGGCTAATACAAT 16943
|||||| |||||| ||||| | || |||| ||| | ||| ||| |||| ||
Sbjct 22403 ATGCGG-ATTTTTTACGTCCA---TATTTCAGATATGGCCGAGTGTG-GGCGAATAAAAG 22349
Query 16944 ACCAGCAATGGGAATATGCCCGC 16966
||| | || ||||||| ||||||
Sbjct 22348 ACCTGAAAAGGGAATAAGCCCGC 22326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200471587871620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |