Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq3892 179 1e-40 seq3409 174 6e-39 seq1209 131 7e-26 seq1599 125 3e-24 seq4809 123 1e-23 seq5862 122 3e-23 seq1653 122 3e-23 seq1577 118 4e-22 >seq3892 Length=6556 Score = 179 bits (198), Expect = 1e-40 Identities = 225/307 (73%), Gaps = 4/307 (1%) Strand=Plus/Minus Query 61415 TTCTTTTCGCACTCGATGAAGTATCGGCGTATCTGGCGGCCTTTTTCGTTACGTTCAACC 61474 ||||| || || ||||||||||| || || | ||| ||||||| ||||| || |||||| Sbjct 3490 TTCTTCTCACATTCGATGAAGTAGCGTCGCACCTGACGGCCTTGCTCGTTGCGCTCAACC 3431 Query 61475 ATCGCAAGCTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGCGGCGGCCTGGA 61534 ||||| || ||||| || |||||||||||||| ||||| ||||| | ||| || || | Sbjct 3430 ATCGCCAGTTCTTTAGCAGTGTCGAGGGTGAGCTGGTAGTCCTTTCTGCGACGCCCGACA 3371 Query 61535 GTTTTCGCCAAATTTGGCGAAAATAGAATGTAGTCTAAATTTTCTACGAATCCATACTCG 61594 ||||||||| ||| ||||||||||| |||||||||| |||| | || || ||||| Sbjct 3370 GTTTTCGCCGAATCTGGCGAAAATACGATGTAGTCTAGATTTGCGGTAAACCCGTACTC- 3312 Query 61595 TTTAGCTTGG--CCCGTATCCAGTTAGAAAAATCTTTACCTACCTCTAAAAATCCATGCA 61652 | | || | | || |||||||| ||||| || ||||| | ||||| ||| | Sbjct 3311 -TGAAATTCGCTCACGAATCCAGTTGGAAAAGTCGCGGCCTACATTCAAAAAAGTATGAA 3253 Query 61653 AATCACGCGCGTTCACCAGAAGCGTAGGTTCATTTGAGATTGTACCTTCAAACACAGGGA 61712 ||| || || || ||||| | | || |||| || || || | ||| ||||||| Sbjct 3252 GATCGCGAGCATTACAAAGAAGAATGGAATCGTTTGCAATGGTGCCATTAAAAACAGGGA 3193 Query 61713 TGAGTTG 61719 |||| || Sbjct 3192 TGAGCTG 3186 >seq3409 Length=8325 Score = 174 bits (192), Expect = 6e-39 Identities = 318/463 (69%), Gaps = 2/463 (0%) Strand=Plus/Plus Query 25510 CTGGCGCTGATTGCCGCAGGGGCTTCTGCGCCTGAAATCCTGGATCAGTTTCTGGATGAA 25569 |||||||| || || || || | |||| || | || ||| || || | | |||| Sbjct 2951 CTGGCGCTCATCGCTGCTGGCGTGACTGCTCCCGTGATGATGGCGCAATTCCAGACTGAA 3010 Query 25570 AAAGAAGGTAACCACACCACGGCATACCGTGATGGTGCGGGGATCTGGACCATCTGCCGT 25629 ||||| || | | | | || || | ||| || | || |||||||| || ||| || Sbjct 3011 AAAGAGGGGATGCGTATAAACGCTTATCCTGACGGCGGCGGCATCTGGACGATTTGCGGT 3070 Query 25630 GGAGCCACCCGGGTGGATGGTAAGCCTGTGATTCCTGGCATGAAGCTGTCGAAGGAAAAA 25689 || | || ||||| ||||| ||||| || | |||||||||||| | | | Sbjct 3071 GGCGTGACACGGGTAGATGGCAAGCCGGTAGTGAAGGGCATGAAGCTGACCGCCGGGCAG 3130 Query 25690 TGCGACCGGGTTAACGCTATCGAACGGGATAAGGCGCTGGCATGGGTGGAGAAAAACATC 25749 || | | || | || |||| | | |||||||| | |||||||| ||| | Sbjct 3131 TGTGCAAAGATTGATGCCGCAGAACAGCAAAAGGCGCTCGATTGGGTGGATCGCAACGTT 3190 Query 25750 AAAGTGCCACTGACTGAACCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAACATT 25809 |||||||| || ||||| | ||||||| || ||||| ||||| ||||| | || || Sbjct 3191 AAAGTGCCGCTCACTGAGACTCAGAAAGTCGGCATTGCCTCATTTTGTCCGTGGAATATC 3250 Query 25810 GGCCCGGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAATT-AATGCAGGAGATCGAAA 25868 || || ||||| || ||| | || ||||| || | |||| ||||| || |||| | Sbjct 3251 GGTCCCGGTAACTGCTTCACCTCAACGTTCTACCG-CAAATTGAATGCCGGCGATCTCAT 3309 Query 25869 AGGTGCCTGCGAAGCGATTCGCTGGTGGATTAAGGACGGTGGCAGGGACTGCCGTATTCG 25928 ||||||||| ||| |||| | |||||| |||||| |||| || |||||||| || Sbjct 3310 TGGTGCCTGCAAAGAGATTAAGCGCTGGATTTGGGACGGAGGCAAAGATTGCCGTATCCG 3369 Query 25929 CTCAAATAACTGTTATGGTCAGGTATCCCGTCGTGACCAGGAG 25971 | | ||||||||||| || ||| || | || |||||||||||| Sbjct 3370 CGCCAATAACTGTTACGGGCAGATAGCGCGGCGTGACCAGGAG 3412 Score = 141 bits (156), Expect = 4e-29 Identities = 189/260 (73%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 26498 CGTAAACTTGCTGGCTGGCTTCAGACTATCAGCCCAAATAAGGTTAAGCTCAAAATCCGA 26557 || ||| | |||| |||||| | |||| || ||||| ||||||| ||| || Sbjct 5332 CGCAAATTGGCTGCCTGGCTGGCCAGTATCCAGCCGAATAAAGTTAAGCCAGAAAGTCGC 5391 Query 26558 GACAAGGTGATCCAGTATCAGGAAGAGTGCGACGATGTTCTCTATGAATACTGGACGAAG 26617 ||||| ||| | ||||||||||| |||||||| || || ||||||||||||||||| || Sbjct 5392 GACAAAGTGGTTCAGTATCAGGAGGAGTGCGATGACGTGCTCTATGAATACTGGACAAAA 5451 Query 26618 GGTTTTGTCGTTAATCCCCGTCGAATG-AGTGTGATGGAAGAACTCAATCAGGCTTGCGC 26676 ||| || |||||||| | | | || || ||| | ||||||||| |||||||| Sbjct 5452 GGTCAGGTTACCAATCCCCG-CAAGCGCAGCGTCATGCAGGAACTCAATGCCGCTTGCGC 5510 Query 26677 TGACATGAAACGGGATAAAAACATTGCCAGTGTGTTTGCTACCGGGCTGAATGAGTGGAA 26736 ||| | ||| ||| ||| | ||||||| ||||||| || || |||| |||||||| Sbjct 5511 CGACTTAAAAACGGACAAAGCCGTTGCCAGCGTGTTTGGCACGGGATTGAACGAGTGGAA 5570 Query 26737 ACAGGTTAAAGCCGCGCATG 26756 | |||| || || |||| Sbjct 5571 AGGCATTAAGGCGGCACATG 5590 >seq1209 Length=44547 Score = 131 bits (144), Expect = 7e-26 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 8665 GATGGCGTAGAGTTTGCCGTCAACAATACGTTTGTTGTTTGTGTCTACTGCGATTGTTGT 8724 ||||||||||| ||||| |||| |||||| || | ||| |||| || |||| || || Sbjct 6743 GATGGCGTAGATCTTGCCATCAATAATACGCTTATCGTTGGTGTTGACGGCGACGGTGGT 6684 Query 8725 TCCATCTGGTATCACGGGTTCCATGCTATCACCAGTAGCCGGAAAACAAAGCACACCAGA 8784 ||||| || || | ||||||||||| || || | ||||| ||||| || || || || Sbjct 6683 GCCATCGGGAATAAATGGTTCCATGCTGTCGCCCTTGGCCGGGAAACAGAGTACGCCGGA 6624 Query 8785 ACCATCACTGTTAGCTCCGACACGGCGCAAGGTTGCTTTTGAGAAGCGTAATTTAAAACC 8844 ||||| || || ||||| ||||| ||||| | ||| || || || || ||||| || Sbjct 6623 GCCATCGGAATTCGCACCGACGCGGCGTAAGGTCGATTTGGAAAACCGCAACTTAAACCC 6564 Query 8845 ATTATGATCTTC 8856 ||||||||||| Sbjct 6563 GTTATGATCTTC 6552 >seq1599 Length=30855 Score = 125 bits (138), Expect = 3e-24 Identities = 136/178 (76%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 61417 CTTTTCGCACTCGATGAAGTATCGGCGTATCTGGCGGCCTTTTTCGTTACGTTCAACCAT 61476 |||||| ||||| |||||||| ||||| | ||| |||||||| ||||| | || ||||| Sbjct 20322 CTTTTCACACTCAATGAAGTAACGGCGAACCTGACGGCCTTTGTCGTTGTGCTCCACCAT 20263 Query 61477 CGCAAGCTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGCGGCGGCCTGGAGT 61536 || || |||||||||||||| |||||||||||||| ||||| | || || || || Sbjct 20262 TGCCAGTTCTTTGGCTGTGTCCAGGGTGAGGTGGTAGTCCTTTCTGCCTCGTCCGTGACC 20203 Query 61537 TTTCGCCAAATTTGGCGAAAATAG-AATGTAGTCTAAATTTTCTACGAATCCATACTC 61593 | | || ||| | | |||||| |||||||| |||||| ||||| ||| |||| Sbjct 20202 TATTTCCCGATTCTG-GGAAATAGCTATGTAGTCCTGATTTTCAACGAAACCAAACTC 20146 >seq4809 Length=3389 Score = 123 bits (136), Expect = 1e-23 Identities = 215/305 (70%), Gaps = 17/305 (6%) Strand=Plus/Plus Query 17087 AATATACCTGTGGTGACTACAGAGCTTCTTGCC-AGCTTATATGGCACAGAACCAGATTA 17145 ||||| ||||| | ||||| |||||| | || ||||| || |||||||| |||| | Sbjct 822 AATATTCCTGTTATTACTACTGAGCTTTTAGCTGAGCTT-TACGGCACAGAGCCAGTTAG 880 Query 17146 CATCCGAAAAAATTTCAATCGGAATTCTGGACGATTTGTTATCGGTAAGCACTACTTTTT 17205 ||||| |||||| ||| || ||| ||| || || ||| || ||||| ||||| Sbjct 881 AATCCGCAAAAATCACAACCGTAATGCTGATCGGTTCGTTGATGGCAAGCA----TTTTT 936 Query 17206 ACTTGAGAATGAGGAGTTGC---GCGAATTTAAGCACAGCATGTCTTTAAGACCTTCTGT 17262 || | || | | | | | ||||| || || |||||||||||| | || Sbjct 937 ACAAAACAACCGGAACTGACCTTGATAATTTGAG---AG--TGTCTTTAAGACACT-TGC 990 Query 17263 GAAAATCGCCCGTAACGTTCGCTCCCTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCA 17322 || ||| ||| ||| |||| ||||| ||||||||||| |||||||| || | || Sbjct 991 AAATATCACCCAAAAC--TCGCAGTCTCATTCTCTGGACAGAGCGCGGAGCCGCTAGGCA 1048 Query 17323 CGCAAAAATGCTCGAAACTGATCAGGCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTA 17382 || || ||||||||||| ||||| | ||||||||| ||||| | ||| |||| || || Sbjct 1049 TGCCAAGATGCTCGAAACCGATCAAGAATGGGAAGTATTCGAGCAGCTGAAAGATTGTTA 1108 Query 17383 TTTCA 17387 |||| Sbjct 1109 CTTCA 1113 >seq5862 Length=3465 Score = 122 bits (134), Expect = 3e-23 Identities = 211/304 (69%), Gaps = 12/304 (4%) Strand=Plus/Plus Query 17087 AATATACCTGTGGTGACTACAGAGCTTCTTGCCAGCTTATATGGCACAGAACCAGATTAC 17146 || ||||| || | ||||| ||| | || || | ||| ||||| | ||| | | Sbjct 1732 AACATACCGGTTATTACTACTGAGTTACTGGCTAACTTGTATGGTGCCGAAGTGAACAGC 1791 Query 17147 ATCCGAAAAAATTTCAATCGGAATTCTGGACGATTTGTTATCGGTAAGCACTACTTTTTA 17206 |||| | |||||||||| || ||| | | |||| ||| |||||||| ||||| | Sbjct 1792 ATCCAACAAAATTTCAAGCGCAATGTGGAAAGATTCATTAATGGTAAGCAT--CTTTTCA 1849 Query 17207 --CTTGAGAATGAGGAGTTGCGCGAATTTAAGCACAGCATGTCTTTAAGACCTTCTGT-G 17263 || || || ||| | | |||| ||| |||| || | ||| | || || | Sbjct 1850 AGCTGGAAGGGGATGAGCTTAGGGAATACAAGAACAGGCTGACAGAAAGTCAGTCAGTTG 1909 Query 17264 AAAATCGCCCGTAACGTTCGCTCCCTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCAC 17323 ||| | | || ||| ||||||||| |||||||| ||||||||||| | ||| Sbjct 1910 CAAAACACACG-------CGCAGCCTCATCCTTTGGACAGAGCGCGGAGCAGCAAGACAC 1962 Query 17324 GCAAAAATGCTCGAAACTGATCAGGCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTAT 17383 || || |||||||| || ||| ||||||||||||| ||||| |||||||||| ||||| Sbjct 1963 GCCAAGATGCTCGAGACAGATAAGGCATGGGAAGTATTCGAGCAACTGGAAGATTGCTAC 2022 Query 17384 TTCA 17387 |||| Sbjct 2023 TTCA 2026 >seq1653 Length=29478 Score = 122 bits (134), Expect = 3e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 91 CAAATTTGGGACATCGTCACTCAATATGTCGTCAATTTTCCTCGCGTGCTCTGTCAAATG 150 || ||| | ||||||| | ||| | ||||||||||| || || || || || || || Sbjct 586 CAGATTAGTGACATCGCCCGCCAAGACTTCGTCAATTTTTCTGGCATGTTCGGTTAAGTG 527 Query 151 ATTAGGTGCAAGGTGTGCGTACCTACGCACCATTTCGATAGACTCCCAGCCGCCCATTTC 210 | |||| | || ||||| | | ||||| |||||| ||||||||| |||||||| Sbjct 526 AACCGGTGATAAATGAGCGTAACGTTGTACCATCTCGATACTCTCCCAGCCCCCCATTTC 467 Query 211 CTGAAGTACTGACAGCGGTACACCTGACTGAATTAACCAACTGGCCCAAGTGTGGCGGAG 270 || | | | ||||| || || |||||||||| ||||||||| ||||| || || || || Sbjct 466 TTGCAATGCAGACAGGGGCACGCCTGACTGAACTAACCAACTTGCCCAGGTATGTCGCAG 407 Query 271 GTCATGAAAACGGAA 285 |||||||| | ||| Sbjct 406 ATCATGAAATCTGAA 392 >seq1577 Length=31499 Score = 118 bits (130), Expect = 4e-22 Identities = 227/329 (69%), Gaps = 18/329 (5%) Strand=Plus/Plus Query 61415 TTCTTTTCGCACTCGATGAAGTATCGGCGTATCTGGCGGCCTTTTTCGTTACGTTCAACC 61474 ||||| || || ||||||||||| || || | ||| ||||||| ||||| || |||||| Sbjct 21929 TTCTTCTCACATTCGATGAAGTAGCGTCGCACCTGACGGCCTTGCTCGTTGCGCTCAACC 21988 Query 61475 ATCGCAAGCTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGC------GGCGG 61528 ||||| |||||||| ||||||| |||||||| ||||| ||||||| | | Sbjct 21989 ATCGCCAGCTCTTTTGCTGTGTTCAGGGTGAGATGGTAGTCCTTGCTTCTTCTATCTCCA 22048 Query 61529 CCTGGAGT-------TTTCGCCAAATTTGGCGAAAATAGAATGTAGTCTAAATTTTCTAC 61581 ||| | || ||| || | |||| | || | ||||||||| ||||| | Sbjct 22049 CCTCGTGTATTTTTGATTCCCCCACTTTGATG-AACCAAAATGTAGTCCGCGTTTTCGAT 22107 Query 61582 GAATCCATACTCGTTTAGCTTGGCCCGT-ATCCAGTTAGAAAAATCTTTACCTACCTCTA 61640 |||||| |||||| || | || | | ||||| | |||||||| | || || | Sbjct 22108 GAATCCGTACTCG-GTAACGCGGTTCTTAATCCATGTTGAAAAATCACGGCGAACATCGA 22166 Query 61641 AAAATCCATGCAAATCACGCGCGTTCAC-CAGAAGCGTAGGTTCATTTGAGATTGTACCT 61699 ||| |||||| | |||||| |||| ||| || || | ||| || || || || || Sbjct 22167 GGAATTCATGCAGCTTACGCGC-ATCACACAGTAGAGTTGCTTCGTTGGAAATAGTGCCG 22225 Query 61700 TCAAACACAGGGATGAGTTGAGTGGTCAT 61728 | || || ||||| || ||| ||||||| Sbjct 22226 TTGAAAACGGGGATAAGCTGATTGGTCAT 22254 Score = 84.2 bits (92), Expect = 9e-12 Identities = 107/143 (75%), Gaps = 7/143 (5%) Strand=Plus/Minus Query 16824 ATACTCTGCGTCAGGTGCTCAAAACACCTTAGCAAGTAGCGGTTACCGCGCCCGACAGAC 16883 ||| || || |||||||| |||||||||| | ||||||| ||||| |||||||||| Sbjct 22461 ATAGTCCGCTACAGGTGCTGAAAACACCTTTTC--GTAGCGGAAACCGCACCCGACAGAC 22404 Query 16884 ATGCGGttttttttGTGTCCAGTCTTCTTGGTTTATGACCGGGCGTGCGGCTAATACAAT 16943 |||||| |||||| ||||| | || |||| ||| | ||| ||| |||| || Sbjct 22403 ATGCGG-ATTTTTTACGTCCA---TATTTCAGATATGGCCGAGTGTG-GGCGAATAAAAG 22349 Query 16944 ACCAGCAATGGGAATATGCCCGC 16966 ||| | || ||||||| |||||| Sbjct 22348 ACCTGAAAAGGGAATAAGCCCGC 22326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200471587871620