Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq57 113 4e-20 >seq57 Length=2082711 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | | | ||||| |||||||| ||||| || | || || |||||| Sbjct 1619086 AACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTC 1619145 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||| || || | | | || |||||||| |||||||| || || ||||| ||||| Sbjct 1619146 CAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 1619205 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||| | | ||| | |||||| | ||||| ||||| | || | ||||| Sbjct 1619206 GATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTT 1619265 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||||||||| | |||||| ||||| Sbjct 1619266 TCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | | | ||||| |||||||| ||||| || | || || |||||| Sbjct 1620454 AACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTC 1620513 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||| || || | | | || |||||||| |||||||| || || ||||| ||||| Sbjct 1620514 CAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 1620573 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||| | | ||| | |||||| | ||||||||||| | || | ||||| Sbjct 1620574 GATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTT 1620633 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||||||||| | ||||| ||||| Sbjct 1620634 TCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | | ||||| |||||||| ||||| || | || || |||||| Sbjct 1619542 AACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTC 1619601 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||| || || | | | || |||||||| |||||||| || || ||||||||||| Sbjct 1619602 TAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTG 1619661 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| || | | || | ||||| | |||||| ||||| | || | ||||| Sbjct 1619662 GATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTT 1619721 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||||||||| | ||||| ||||| Sbjct 1619722 TCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | |||||||| || || ||||| || || || || |||||| Sbjct 1620226 AACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCATCTTC 1620285 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||| || || | | |||| | | |||||||||||| || || ||||||||||| Sbjct 1620286 CAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATCTTG 1620345 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||||| | ||| | ||||| | || || ||||| | || | ||||| Sbjct 1620346 AATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGGTTTT 1620405 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || | ||||| | ||| |||||||| Sbjct 1620406 TCCGGTTAACGTTTTGACGAATATCTGCAT 1620435 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || || |||||||| || || || |||||| | ||| || || | | Sbjct 1619786 GATTCTTTCTGGATATTGTAGTCAGACAGAGTGCGACCATCTTCCAACTGCTTGCCTGCA 1619845 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | |||||||||||| || || ||||||||||| |||||| ||||| Sbjct 1619846 AAGATCAATCTCTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACA 1619905 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | ||| |||||||| | || | || || ||||| | || || Sbjct 1619906 TTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGTAATGGTCTTTCCAGTTAAGGTCTTA 1619965 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 1619966 ACAAATATCTGCAT 1619979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476512678507320