Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq57 113 4e-20 seq504 102 7e-17 >seq57 Length=2082711 Score = 113 bits (124), Expect = 4e-20 Identities = 169/236 (72%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 35503 TTTA-TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 |||| ||||| ||||| || |||| || | |||||| || ||||| ||||| || | Sbjct 1618605 TTTAGTTTCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTAT 1618664 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 |||| | |||||| || | || |||| || || || || || ||||||| ||||||| Sbjct 1618665 AATCTGACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGT 1618724 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT-CAGAGTTGCCACCGTGTCGCTC 35680 | | || | | |||||||| ||| ||| |||| || | || | | ||||| Sbjct 1618725 CAGGTGGTATTCCTTCCTTGTCT-TGAATTTTCGCTTTCACATTTTCAATAGTGTCAGAT 1618783 Query 35681 GATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||| || || | || || ||||| || |||||||||||||||||||| ||||| Sbjct 1618784 GGTTCAACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| ||||| ||| || || || |||||||| | || || || | || ||| Sbjct 1620227 ACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCATCTTCC 1620286 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || ||||| ||||||| ||| || || | |||| | || || || || Sbjct 1620287 AACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATCT-TG 1620345 Query 35648 ATCTTTTGCTT-CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| |||| || | || | | || || | ||| || || | ||||| ||||| Sbjct 1620346 AATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGGTTTT 1620405 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || ||||| || ||||||||||| Sbjct 1620406 TCCGGTTAACGTTTTGACGAATATCTGCAT 1620435 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||| |||||||| | | ||||| | || |||| |||||| || ||||| Sbjct 1620472 CTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAA 1620531 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 || | |||||||| || | || | | ||||| ||| ||| ||| || || | | Sbjct 1620532 AATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGAT-TTTGGCTTTTACAT 1620590 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || | ||||| || | || || ||||| || |||| |||||||| Sbjct 1620591 TTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCA 1620650 Query 35724 CAAATATCTGCATTC 35738 |||| || ||||||| Sbjct 1620651 CAAAAATTTGCATTC 1620665 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 |||||| ||| || || || || ||||| || | || || || | || |||| ||| Sbjct 1619776 ATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTGCGACCATCTTCCAACTG 1619835 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||| || ||||| ||||| | ||| || || | |||| | || || || ||| || Sbjct 1619836 CTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCTTCTTTATCT-TGAATTT 1619894 Query 35653 TTGCTT-CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCG 35711 | |||| || | || | | |||||| || |||||| || | || || || || || | Sbjct 1619895 TAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGTAATGGTCTTTCCAG 1619954 Query 35712 TCAAAGTTTTCACAAATATCTGCATTC 35738 | || || || |||||||||||||||| Sbjct 1619955 TTAAGGTCTTAACAAATATCTGCATTC 1619981 >seq504 Length=327254 Score = 102 bits (112), Expect = 7e-17 Identities = 138/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 35547 CCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || |||||||||| | ||| || | || || ||||| || || ||||| Sbjct 214103 CCTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAA 214162 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | ||||| || | ||||| | || || || ||||||| ||| | | || Sbjct 214163 ATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTT 214222 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | ||| ||||| | || || |||||||||||||||||||||||| Sbjct 214223 TCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACA 214282 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 214283 AAAATTTGCAT 214293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450700415327960