Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_026611.1
Length=43129
Score E
Sequences producing significant alignments: (Bits) Value
seq1206 188 2e-43
seq1653 129 2e-25
>seq1206
Length=31275
Score = 188 bits (208), Expect = 2e-43
Identities = 257/358 (72%), Gaps = 3/358 (1%)
Strand=Plus/Plus
Query 37678 AGCTAGAAAACCAACTCGCCATCGCTGCGCCAAAAGTGGATTTCGCCGATCGCGTCTCTG 37737
|| |||||||||| | || ||||| |||||||| || || || || ||||| ||| ||
Sbjct 12855 AGTTAGAAAACCAGTTAGCTATCGCCGCGCCAAAGGTCGAGTTTGCTGATCGTGTCGGTG 12914
Query 37738 AGGCTGGCGGCGTTCTTATCGGTAACTACGCCAAAGCAGTAGGGATCGGACAGAACAAAC 37797
|||||| ||||| || ||||| |||||||| ||| | ||||| |||| | ||||| |
Sbjct 12915 AGGCTGCTGGCGTGCTCATCGGCAACTACGCGAAAACCGTAGGACTCGGCCCCAACAAGC 12974
Query 37798 TGTTTGCTTGGTTACGTGATAACGGCGTCCTTATGGCGGCCGGCGAGCGAAGAAACGTCC 37857
| ||||| ||| | || ||||| | || || || || | |||| || | |||||||
Sbjct 12975 TCTTTGCGTGGCTGCGCGATAAGCGGGTGCTGATCGCTTCTGGCGCTCGCCGCAACGTCC 13034
Query 37858 CGCGCCAGGAGTATTTGGGGCGAGGCTATTTCACCGTTAAAGAAACAGCCGTCAATACCA 37917
|| |||||||| ||| |||| |||||||| || || || |||| | ||||
Sbjct 13035 CGATGCAGGAGTACATGGATAGAGGTTATTTCACTGTCCGTGAGACGCCCGTAGACACCA 13094
Query 37918 ATCACGGCGTGACGATCTCGTTCACATCAAAAATCACCGGAAAGGGGCAGCAATGGTTAA 37977
|||||||| | ||||| ||||| | || |||||||| ||||| ||||||||| | |
Sbjct 13095 ATCACGGCATTCAAATCTCATTCACGACGAAGATCACCGGCAAGGGCCAGCAATGGCTGA 13154
Query 37978 CCAGGAAGCTTATGGATCATGGGTTGCTTAAAGCTATCGGGGAGGATGCCGCATGAAC 38035
| ||||| | | ||| || | || ||||| || || | | |||||||||||
Sbjct 13155 CGCGGAAGATGCTTGATGCGGGTCTTCTGAAAGC---CGTGGGGAACGCCGCATGAAC 13209
>seq1653
Length=29478
Score = 129 bits (142), Expect = 2e-25
Identities = 231/332 (70%), Gaps = 14/332 (4%)
Strand=Plus/Minus
Query 22385 GTCAATTTTCTTGGCATGCTCAGTGAGATGGTTGGGGGCTAGGTGCGCGTATCTCCTGAC 22444
||||||||| ||||||| || || | || || | || || ||||| | ||
Sbjct 556 GTCAATTTTTCTGGCATGTTCGGTTAAGTGAACCGGTGATAAATGAGCGTAACGTTGTAC 497
Query 22445 CATCTCTATGCACTCCCAGCCTCCCATTTCTTGGAGCGCTGAAAGCGGTACTCCAGCTTG 22504
|||||| || | ||||||||| ||||||||||| | || || || || || || | ||
Sbjct 496 CATCTCGATACTCTCCCAGCCCCCCATTTCTTGCAATGCAGACAGGGGCACGCCTGACTG 437
Query 22505 GATTAGCCAACTCGCCCACGTGTGCCGGAGATCGTGAAATCTGAAATCCTCTATCCCGGC 22564
| || |||||| ||||| || || || ||||| ||||||||||| || ||| || |
Sbjct 436 AACTAACCAACTTGCCCAGGTATGTCGCAGATCATGAAATCTGAAGTCAGTTATTCCCAC 377
Query 22565 CCTC--TTTAGTCCAATATTCCACGCTGTATTGTCGTCAACCCTCATCTTTCGCACTGCG 22622
||| |||| || | ||||| || | |||||| || || | ||| ||||| |||||
Sbjct 376 TCTCCGTTTA--CCTGTGTTCCATGCAGAATTGTCATCCACTCGCATTTTTCGTACTGC- 320
Query 22623 GGTGTTTTTGTCCCATCTGGCC----GGT-AACCAGGTTTTGTATGAACAAACACCCACC 22677
|| | | | ||| || || ||| | | ||| || |||||||| || | |
Sbjct 319 --TGCTGTAGCCCCGCCT--CCAAGAGGTGTATGTGCTTTGGTGTGAACAAAGACAAAGC 264
Query 22678 GCGAGTGCTTCCCTATCTGATCGCGAAGAACT 22709
| |||||| | ||||||||||||||||| |||
Sbjct 263 GTGAGTGCCTGCCTATCTGATCGCGAAGCACT 232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137864121357054
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |