Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_026611.1 Length=43129 Score E Sequences producing significant alignments: (Bits) Value seq1206 188 2e-43 seq1653 129 2e-25 >seq1206 Length=31275 Score = 188 bits (208), Expect = 2e-43 Identities = 257/358 (72%), Gaps = 3/358 (1%) Strand=Plus/Plus Query 37678 AGCTAGAAAACCAACTCGCCATCGCTGCGCCAAAAGTGGATTTCGCCGATCGCGTCTCTG 37737 || |||||||||| | || ||||| |||||||| || || || || ||||| ||| || Sbjct 12855 AGTTAGAAAACCAGTTAGCTATCGCCGCGCCAAAGGTCGAGTTTGCTGATCGTGTCGGTG 12914 Query 37738 AGGCTGGCGGCGTTCTTATCGGTAACTACGCCAAAGCAGTAGGGATCGGACAGAACAAAC 37797 |||||| ||||| || ||||| |||||||| ||| | ||||| |||| | ||||| | Sbjct 12915 AGGCTGCTGGCGTGCTCATCGGCAACTACGCGAAAACCGTAGGACTCGGCCCCAACAAGC 12974 Query 37798 TGTTTGCTTGGTTACGTGATAACGGCGTCCTTATGGCGGCCGGCGAGCGAAGAAACGTCC 37857 | ||||| ||| | || ||||| | || || || || | |||| || | ||||||| Sbjct 12975 TCTTTGCGTGGCTGCGCGATAAGCGGGTGCTGATCGCTTCTGGCGCTCGCCGCAACGTCC 13034 Query 37858 CGCGCCAGGAGTATTTGGGGCGAGGCTATTTCACCGTTAAAGAAACAGCCGTCAATACCA 37917 || |||||||| ||| |||| |||||||| || || || |||| | |||| Sbjct 13035 CGATGCAGGAGTACATGGATAGAGGTTATTTCACTGTCCGTGAGACGCCCGTAGACACCA 13094 Query 37918 ATCACGGCGTGACGATCTCGTTCACATCAAAAATCACCGGAAAGGGGCAGCAATGGTTAA 37977 |||||||| | ||||| ||||| | || |||||||| ||||| ||||||||| | | Sbjct 13095 ATCACGGCATTCAAATCTCATTCACGACGAAGATCACCGGCAAGGGCCAGCAATGGCTGA 13154 Query 37978 CCAGGAAGCTTATGGATCATGGGTTGCTTAAAGCTATCGGGGAGGATGCCGCATGAAC 38035 | ||||| | | ||| || | || ||||| || || | | ||||||||||| Sbjct 13155 CGCGGAAGATGCTTGATGCGGGTCTTCTGAAAGC---CGTGGGGAACGCCGCATGAAC 13209 >seq1653 Length=29478 Score = 129 bits (142), Expect = 2e-25 Identities = 231/332 (70%), Gaps = 14/332 (4%) Strand=Plus/Minus Query 22385 GTCAATTTTCTTGGCATGCTCAGTGAGATGGTTGGGGGCTAGGTGCGCGTATCTCCTGAC 22444 ||||||||| ||||||| || || | || || | || || ||||| | || Sbjct 556 GTCAATTTTTCTGGCATGTTCGGTTAAGTGAACCGGTGATAAATGAGCGTAACGTTGTAC 497 Query 22445 CATCTCTATGCACTCCCAGCCTCCCATTTCTTGGAGCGCTGAAAGCGGTACTCCAGCTTG 22504 |||||| || | ||||||||| ||||||||||| | || || || || || || | || Sbjct 496 CATCTCGATACTCTCCCAGCCCCCCATTTCTTGCAATGCAGACAGGGGCACGCCTGACTG 437 Query 22505 GATTAGCCAACTCGCCCACGTGTGCCGGAGATCGTGAAATCTGAAATCCTCTATCCCGGC 22564 | || |||||| ||||| || || || ||||| ||||||||||| || ||| || | Sbjct 436 AACTAACCAACTTGCCCAGGTATGTCGCAGATCATGAAATCTGAAGTCAGTTATTCCCAC 377 Query 22565 CCTC--TTTAGTCCAATATTCCACGCTGTATTGTCGTCAACCCTCATCTTTCGCACTGCG 22622 ||| |||| || | ||||| || | |||||| || || | ||| ||||| ||||| Sbjct 376 TCTCCGTTTA--CCTGTGTTCCATGCAGAATTGTCATCCACTCGCATTTTTCGTACTGC- 320 Query 22623 GGTGTTTTTGTCCCATCTGGCC----GGT-AACCAGGTTTTGTATGAACAAACACCCACC 22677 || | | | ||| || || ||| | | ||| || |||||||| || | | Sbjct 319 --TGCTGTAGCCCCGCCT--CCAAGAGGTGTATGTGCTTTGGTGTGAACAAAGACAAAGC 264 Query 22678 GCGAGTGCTTCCCTATCTGATCGCGAAGAACT 22709 | |||||| | ||||||||||||||||| ||| Sbjct 263 GTGAGTGCCTGCCTATCTGATCGCGAAGCACT 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137864121357054