Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq1206 497 3e-136 seq8456 183 8e-42 seq4809 105 2e-18 seq5862 98.7 2e-16 seq2784 98.7 2e-16 >seq1206 Length=31275 Score = 497 bits (550), Expect = 3e-136 Identities = 956/1403 (68%), Gaps = 10/1403 (1%) Strand=Plus/Plus Query 6979 ATGCCGATTCAGCAACTTCCGCTTATGAAAGGTGTCGGCAAAGACTTTCGAAACGCCGAC 7038 |||||||| || |||||||| || || || || || || ||| |||| || |||| ||| Sbjct 25841 ATGCCGATACAACAACTTCCCCTGATTAAGGGCGTTGGAAAAAACTTCCGGGACGCTGAC 25900 Query 7039 TATATCGACTATCTGCCAGTGAATATGTTGGCTACACCCAAAGAAATCCTGAACAGCAGC 7098 ||| | || || || || ||||||||||| ||||||| || | |||||||||||| Sbjct 25901 TATGTTGATCTGCTTCCGGTCAATATGTTGGCGACACCCAGGCAAGTGCTGAACAGCAGC 25960 Query 7099 GGATATCTTCGCTCATTCCCGGGCATTGCCAAACGTTCTGATGTGAATGGTGTATCGCGC 7158 |||||| | ||||||||||| ||||| | ||| || || ||||| ||| ||||||| Sbjct 25961 GGATATTTGCGCTCATTCCCCGGCATAGACAAGCGATCGGATGTTGCAGGTATATCGCGT 26020 Query 7159 GGTGTCGAGTACAACATGGCGCAGAGTGCTGTTTATCGCGTGTGTGGTGGGAAGCTCTAC 7218 || | || ||||| || |||| ||| || |||||||| ||||| || | || || Sbjct 26021 GGCGCAATGTTCAACACTGCTCAGAATGCCGTATATCGCGTTTGTGGAGGTAGTCTGTAT 26080 Query 7219 AAAGGCGAAAGCGAAGTCGGTGACGTCG-CTGGAAGTGGTCGCGTATCAATGGCGCATGG 7277 |||| | || ||| ||| | |||| |||||| || | ||||||||| | Sbjct 26081 CGTGGCGCGTCGGTGGTTGGTT-CGTTGTCTGGCTCTGGTCGTGTGCCGATGGCGCATAG 26139 Query 7278 TCGAACATCTCAGGCTGTAGGCGTTAATGGTCAACTGGTCGAGTATCGCTATGATGGCAC 7337 || | |||||||| || ||| ||||| | || | ||| |||| |||||||| Sbjct 26140 CCGCAACTCTCAGGCGGTGATCGTCGGCGGTCAGGTTGTGCAATATGGCTACGATGGCAC 26199 Query 7338 GGTTAAAACAGTCTCAAACTGGCCTACTGATAGCGGATTCACTCAGTATGAGTTAGGCTC 7397 ||| ||||| || | ||||||||| || || ||| |||||| || | ||||| Sbjct 26200 GGTGAAAACTGTTGCTAACTGGCCTGTATCGAGTGGCACCACGCAGTATCAGCTGGGCTC 26259 Query 7398 AGTCCGCGATATTACGCGCTTGCGTGGGCGTTATGCGTGGTCAAAAGACGGCACTGATTC 7457 | || ||||| | | || || || | |||||| ||||| || |||||||| Sbjct 26260 ATCGCGTGATATCTGCTGGTCACGCGGTAACTACGTGTGGTCGAAAGATGGGACTGATTC 26319 Query 7458 ATGGTTTATCACTGACCTTGAAGACGAATCGCATCCTGACCGTTACAGCGCACAATATCG 7517 | || ||| |||| | || || || | ||| || ||| | || |||| || Sbjct 26320 GTTTTTCATCTCTGATTTGGATGATGAGGCTTTTCCCGATAAATACCGTGCTGAATACCG 26379 Query 7518 CGCAGAATCGCAGCCGGACGGCATCATCGGCATCGGAACATGGCGAGACTTCATCGTCTG 7577 || || || || || |||||||| || || | || ||||||| || | | || || Sbjct 26380 TGCGGAGTCACAACCAGACGGCATTATTGGTGTTGGTTCATGGCGTGATATGGTTGTGTG 26439 Query 7578 CTTTGGCTCATCGACGATAGAATATTTCTCCCTGACGGGCGCAACCACTGTTG---GTGC 7634 ||| ||| || | |||| || ||||| || |||||||| | | ||| || || Sbjct 26440 CTTCGGCACAACCACGACTGAGTATTTTTCTCTGACGGGT---AACTCTGGTGCGGGTCA 26496 Query 7635 CGCTTTGTATGTCGCCCAGCCATCGTTGATGGTGCAAAAAGGAATCGCCGGAACCTACTG 7694 || | || |||| | || ||| ||||| |||||| || || || || | || Sbjct 26497 GGCGGTATACATCGCTAACCCGGCGTACATGGTCACAAAAGGGATAGCTGGGACGTTTTG 26556 Query 7695 CAAAACGCCGTTTGCTGATTCGTATGCGTTCATCAACAATCCGGCAACAGGTGCGCCGTC 7754 ||| |||||| || | | || | |||| ||| ||||||||||| || ||||| Sbjct 26557 CAAGTGCCCGTTTATGGACGCATTCGCCATTATCAGCAACCCGGCAACAGGCGCACCGTC 26616 Query 7755 TGTTTACATCATCGGCTCCGGTCAGGTATCACCAATCGCCAGCGCGAGCATTGAGAAAAT 7814 ||| ||| | || | ||| ||||||| ||| ||||| || | | |||||||| Sbjct 26617 TGTCTACCTGATTGACTCTGGTCAGGCCAAACCCATCGCATCAGCAACGACTGAGAAAAC 26676 Query 7815 ACTACGCTCCTACACTGCTGATGAACTGGCTGATGGCGTGATGGAGTCTCTGCGATTTGA 7874 |||||| |||||| | ||| || | |||||| |||||||| |||| || || Sbjct 26677 GCTACGCGAATACACTAACGCTGAGCTATCAACTGGCGTCATGGAGTCATTGCGTTTCGA 26736 Query 7875 TGCTCATGAGTTGCTGATTATCCACCTTCCGCGCCACGTCCTCGTGTACGACGCATCTTC 7934 |||| || |||||||||||||||| || || || || || |||| || | || Sbjct 26737 CTCTCACGAACTGCTGATTATCCACCTGCCACGTCATGTGCTGGTGTTTGATTCGTCGGT 26796 Query 7935 AAGCGCCAATGGTCCTCAATGGTGTGTGTTGAAAACAGGCCTGTATGACGATGTGTACCG 7994 |||| | ||||| || ||| | ||||||| ||||||| ||| || |||||||| Sbjct 26797 GAGCGAGAGCGGTCCACAGTGGGCCATCCTGAAAACGGGCCTGTTTGATGACGTGTACCG 26856 Query 7995 CGCTATCGACTTCATTTACGAAGGCAATCAGATAACGTGCGGCGATAAGCTGGAATCTGT 8054 | || || ||| | ||||||||| || || ||||| || |||||||||||||| Sbjct 26857 TGGGATTGATTTCTTCTACGAAGGCGGCGCTATCACATGCGGTGACAAGCTGGAATCTGT 26916 Query 8055 TACCGGGAAACTGCAATTCGACATCAGCAG-CCAGTACGACAAGCAACAGGAACACCTGC 8113 ||||| | || |||| |||| | | ||| || ||||| |||||||| ||| ||| Sbjct 26917 GACCGGACAGCT-TAATTTTGCATCGTCTGCCCAATATGACAAACAACAGGAGCACTTGC 26975 Query 8114 TGTTTACTCCGTTGTTCAAAGCGGATAACGCCAGAGTTTTCGACCTTGAAGTTGAATCGT 8173 | | | | ||| | |||| ||||| ||||| ||| | |||||||| || ||||| | Sbjct 26976 TCTATTCCCCGCTCATCAAGGCGGACAACGCGAGACTGTTCGACCTCGAGCTTGAAGTAT 27035 Query 8174 CAACTGGCGTTGCGCAGTACGCTGACCGCCTGTTCCTCTCTGCTACCACTGACGGCATAA 8233 | || |||||||| || | |||||| || ||||| ||||| | |||||||| ||||| | Sbjct 27036 CGACGGGCGTTGCTCAATTCGCTGAACGGCTGTTTATCTCTACCACCACTGATGGCATCA 27095 Query 8234 ATTACGGGCGTGAGCAGATGATTGAGCAGAATGAACCGTTCGTTTACGACAAGCGCGTTT 8293 | ||||| | || || ||| | | ||||| ||||||| || ||| || | | Sbjct 27096 ACTACGGCAGGGAACAAATGGTGCCGTGGAATGCACCGTTCCGCTATGACCAGAGGGCGC 27155 Query 8294 TGTGGAAGCGAGTAGGGCGCATCAGGAAAAATGTCGGTTTCAAATTGCGCGTTATCACGA 8353 | ||| || | ||||| | | ||||| |||| ||||| || | |||| || | Sbjct 27156 TATGGCGTCGGATTGGGCGTGTGCGCAAAAACATCGGCTTCAAGTTCAGAATTATTACTA 27215 Query 8354 AGTCACCAGTAACACTATCCGGG 8376 | || ||||| ||||| ||| Sbjct 27216 AAAGCCCGGTAACCCTATCAGGG 27238 Score = 95.1 bits (104), Expect = 3e-15 Identities = 193/283 (68%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 28869 GGAGCGTCGTGTGGCAGAAGTTGAAGATGGTTATACCCGTCTTGCAAATGCCCTGTATGA 28928 ||||| ||| ||||| || ||| ||||| | | | || || | | || || || Sbjct 13254 GGAGCCTCGCGTGGCTGACACTGATGATGGCTTCATCATGCTGGCGATGGAGCTTTACGA 13313 Query 28929 AGAGCTTATCGGAGCAGATTTAACGAAAAATCAGAGCAAGGTTGCCCACGCCATATGCCG 28988 ||| || ||||| || || | || ||||| |||| | || ||||| ||||||| Sbjct 13314 AGAACTGATCGGCGCTAATCTGACTCGCAATCAAGCCAAGATGGCACACGCTGTATGCCG 13373 Query 28989 TAAAACATACGGCTACGGTAAAAAGATGGATCGCATCTCTGATAGTCAGTTAGCTCAAAT 29048 || |||||||||| | || || ||||||||||| |||| ||||| ||||| | | Sbjct 13374 AAAGACATACGGCTTCAAGAAGAAAATGGATCGCATTGCTGACAGTCAATTAGCCGAGCT 13433 Query 29049 TACCAGGCTGCCAAGACAGAAGGTAAACAAGGCCAAGAATGAGCTTATCGCGATGAAGGT 29108 | ||| | || | |||| |||| ||||| |||||||||||||| ||||| || Sbjct 13434 TTGCAGAATCAGCAGGCCAAAGGCCAACATTGCCAA-AATGAGCTTATCGCCATGAAAGT 13492 Query 29109 TATCCTTCGCGAAGGCCAGC-AAATCGGGCCTAACAAGAACAT 29150 | | | || || ||| |||| || || ||||| ||||| Sbjct 13493 TCTGGTGAAAGACGG-AAGCAAAATTGGCCCAAACAAAAACAT 13534 >seq8456 Length=1453 Score = 183 bits (202), Expect = 8e-42 Identities = 290/412 (70%), Gaps = 3/412 (1%) Strand=Plus/Plus Query 7966 AAAACAGGCCTGTATGACGATGTGTACCGCGCTATCGACTTCATTTACGAAGGCAATCAG 8025 ||||| ||||||| ||| || |||||||| | || || ||| | ||||||||| Sbjct 1 AAAACGGGCCTGTTTGATGACGTGTACCGTGGGATTGATTTCTTCTACGAAGGCGGCGCT 60 Query 8026 ATAACGTGCGGCGATAAGCTGGAATCTGTTACCGGGAAACTGCAATTCGACATCAGCAG- 8084 || || |||| || |||||||||||||| ||||||| | |||| | |||| | | Sbjct 61 ATCACATGCGT-GACAAGCTGGAATCTGTGACCGGGACAGCTTAATTTG-CATCGTCTGC 118 Query 8085 CCAGTACGACAAGCAACAGGAACACCTGCTGTTTACTCCGTTGTTCAAAGCGGATAACGC 8144 ||| || ||||| |||||||| ||| |||| | | | ||| | |||| ||||| ||||| Sbjct 119 CCAATATGACAAACAACAGGAGCACTTGCTCTATTCCCCGCTCATCAAGGCGGACAACGC 178 Query 8145 CAGAGTTTTCGACCTTGAAGTTGAATCGTCAACTGGCGTTGCGCAGTACGCTGACCGCCT 8204 ||| | |||||||| || ||||| || || |||||||| || | |||||| || || Sbjct 179 GAGACTGTTCGACCTCGAGCTTGAAGTATCGACGGGCGTTGCTCAATTCGCTGAACGGCT 238 Query 8205 GTTCCTCTCTGCTACCACTGACGGCATAAATTACGGGCGTGAGCAGATGATTGAGCAGAA 8264 ||| ||||| | |||||||| ||||| || ||||| | || || ||| | | ||| Sbjct 239 GTTTATCTCTACCACCACTGATGGCATCAACTACGGCAGGGAACAAATGGTGCCGTGGAA 298 Query 8265 TGAACCGTTCGTTTACGACAAGCGCGTTTTGTGGAAGCGAGTAGGGCGCATCAGGAAAAA 8324 || ||||||| || ||| || | | | ||| || | ||||| | | ||||| Sbjct 299 TGCACCGTTCCGCTATGACCAGAGGGCGCTATGGCGTCGGATTGGGCGTGTGCGCAAAAA 358 Query 8325 TGTCGGTTTCAAATTGCGCGTTATCACGAAGTCACCAGTAACACTATCCGGG 8376 |||| ||||| || | |||| || || || ||||| ||||| ||| Sbjct 359 CATCGGCTTCAAGTTCAGAATTATTACTAAAAGCCCGGTAACCCTATCAGGG 410 >seq4809 Length=3389 Score = 105 bits (116), Expect = 2e-18 Identities = 244/363 (67%), Gaps = 10/363 (3%) Strand=Plus/Plus Query 32189 TCAAATCAAATACGCCAGCACACGACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTG 32248 |||||||| | || | || | |||||||| |||| ||| |||| | | ||| Sbjct 71 TCAAATCACACACCAGACCAGAGCACAAGGACACATGGCGAACCCCGCCCGAGGTCTTTC 130 Query 32249 ATGCACTGGATATTGAGTTTGGATTCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTC 32308 | || |||||| |||||||| |||| || ||| | || ||| | || | ||| | | Sbjct 131 AGGCGCTGGATGCGGAGTTTGGCTTCTACCTCGATGCCGCCGCGGACCACGACAATACCC 190 Query 32309 TGTGTGCTCACTGGCTAACTGAGGCC----GACGACGCGCTCAATTCTGAGTGGGTAAGC 32364 ||||| || || || |||| ||| || || || || | ||| ||| ||| Sbjct 191 TGTGTCGTC--TG--TATCTGACGCCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGC 246 Query 32365 CACGGTGCAATCTGGAATAACCCACCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCC 32424 ||| || |||| || || ||||||||||||||| | || ||||| || ||||| Sbjct 247 ACCGGCGCCATCTTCTGCAATCCCCCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCT 306 Query 32425 GCTGAGCAGTGCATACAACAGCGACAGACGGTAGTTATGCTTGTGCCAGAGGATATGTCA 32484 ||||||||| || | ||| | ||||| |||||||| |||| | ||||| || Sbjct 307 GCTGAGCAGAGCCGCAAGCAGAATAAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCG 366 Query 32485 GTCGGATGGTTCAGCA-AGGCTCTGGAGAGTGTTGACGAAGTTCGCATTATCACTGATGG 32543 ||||||||| ||| ||||| | | | ||||| || || ||| | ||||| || || Sbjct 367 ACGGGATGGTTC-GCACTGGCTCAGAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGG 425 Query 32544 ACG 32546 || Sbjct 426 GCG 428 >seq5862 Length=3465 Score = 98.7 bits (108), Expect = 2e-16 Identities = 228/339 (67%), Gaps = 10/339 (3%) Strand=Plus/Plus Query 32213 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 32272 |||||||| |||| ||| |||| | | || | || |||||| |||||||| | Sbjct 23 ACAAGGACACATGGCGAACCCCGCACGAGGTCTTCCAGGCGCTGGATGCGGAGTTTGGCT 82 Query 32273 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGTGCTCACTGGCTAACTGAGG 32332 ||| || ||| | || ||| | || | ||| | |||||| || || || |||| | Sbjct 83 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 138 Query 32333 CC----GACGACGCGCTCAATTCTGAGTGGGTAAGCCACGGTGCAATCTGGAATAACCCA 32388 || || || || || | ||| ||| ||| ||| || |||| || || Sbjct 139 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 198 Query 32389 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 32448 ||||||||||||||| | || ||||| || ||||| ||||||||| || | ||| Sbjct 199 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 258 Query 32449 CAGACGGTAGTTATGCTTGTGCCAGAGGATATGTCAGTCGGATGGTTCAGCA-AGGCTCT 32507 | ||||| |||||||| |||| | ||||| || ||||||||| ||| |||| | Sbjct 259 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACAGGCACA 317 Query 32508 GGAGAGTGTTGACGAAGTTCGCATTATCACTGATGGACG 32546 | | | ||||| || || ||| | ||||| || || || Sbjct 318 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 356 >seq2784 Length=12453 Score = 98.7 bits (108), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 28921 CTGTATGAAGAGCTTATCGGAGCAGATTTAACGAAAAATCAGAGCAAGGTTGCCCACGCC 28980 || || ||||| || ||||| || || | || ||||| |||||| || ||||| Sbjct 4707 CTTTACGAAGAACTGATCGGCGCTAATCTGACACGCAATCAAGCCAAGGTGGCACACGCT 4648 Query 28981 ATATGCCGTAAAACATACGGCTACGGTAAAAAGATGGATCGCATCTCTGATAGTCAGTTA 29040 ||||||| || |||||||||| | || || ||||||||||| |||| ||||| ||| Sbjct 4647 GTATGCCGAAAGACATACGGCTTCAAGAAGAAAATGGATCGCATTGCTGACAGTCAATTA 4588 Query 29041 GCTCAAATTACCAGGCTGCCAAGACAGAAGGTAAACAAGGCCAAGAATGAGCTTATCGCG 29100 || | || ||| | || | |||| |||| ||||| |||||||||||||| Sbjct 4587 GCCGAGCTTTGCAGAATCAGCAGGCCAAAGGCCAACATTGCCAAAAATGAGCTTATCGCC 4528 Query 29101 ATGAAGGTTATCCTTCGCGAAGGCCAGC-AAATCGGGCCTAACAAGAACAT 29150 ||||| ||| | | || || ||| |||| || || ||||| ||||| Sbjct 4527 ATGAAAGTTCTGGTGAAAGACGG-AAGCAAAATTGGCCCAAACAAAAACAT 4478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123828478174176