Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq57 114 1e-20 seq504 105 6e-18 seq126 105 6e-18 >seq57 Length=2082711 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | || || || |||||||||||||| || | | ||| || | ||||| Sbjct 1619543 ACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGC-CATCTTC 1619601 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||| || || || |||| |||||||| ||||| || || | || |||||||| Sbjct 1619602 TAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTG 1619661 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| || || | | | |||| || || | | |||||||| ||||| |||| ||| Sbjct 1619662 GATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTT 1619721 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||||||||||||||| |||||||| Sbjct 1619722 TCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 || ||||| | || || || |||||||||||||| || | | ||| || | ||||| Sbjct 1619087 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGC-CATCTTC 1619145 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||| || || || |||| |||||||| ||||| || || | || || ||||| Sbjct 1619146 CAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 1619205 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| ||| ||| | |||| | ||| || | || |||||||| ||||| || | ||| Sbjct 1619206 GATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTT 1619265 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||||||||| || |||||||| Sbjct 1619266 TCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 || ||||| | || || || |||||||||||||| || | | ||| || | ||||| Sbjct 1620455 ACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGC-CATCTTC 1620513 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||| || || || |||| |||||||| ||||| || || | || || ||||| Sbjct 1620514 CAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 1620573 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| ||| ||| | |||| | ||| || | || || ||||| ||||| || | ||| Sbjct 1620574 GATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTT 1620633 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||||||||||||||| |||||||| Sbjct 1620634 TCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 107 bits (118), Expect = 2e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || || || ||||| | || ||| | |||||| || || || || |||||||| || || Sbjct 1618610 TTTCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCT 1618669 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | |||| | ||||| | ||||| || ||| |||| | | || || || || Sbjct 1618670 GACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGT 1618729 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | || || || || || || ||||| |||| | |||||| | | |||| Sbjct 1618730 GGTATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCA 1618789 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 ||||| ||||| || | ||| || |||| |||||||||||| ||||||||| || || Sbjct 1618790 ACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCATACCTCCT 1618846 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| | |||||| ||||| ||||| || ||||||||||| || |||| | ||||| Sbjct 1619770 TACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTGCGACCATCTTC 1619829 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||| || || || | || | | ||||||||| || || | ||| |||||||| Sbjct 1619830 CAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCTTCTTTATCTTG 1619889 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 || || ||||| |||||| ||||| | | ||| ||||||| || || | || Sbjct 1619890 AATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGTAATGGTCTT 1619949 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || | || || ||||| || ||||| Sbjct 1619950 TCCAGTTAAGGTCTTAACAAATATCTGCAT 1619979 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| | ||||| || || ||||| || ||||| || || | |||| | ||||| Sbjct 1619314 TACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAGAGAGTGCGGCCATCTTC 1619373 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| || |||||| | || | | ||||| || || || | || |||||||| Sbjct 1619374 TAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTGGAATTCCTTCTTTATCTTG 1619433 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 || ||| || | |||| | |||||| | | ||||||||| || || || | || Sbjct 1619434 AATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAACTTCAAGTGTAATGGTCTT 1619493 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| ||||||||||| |||||| Sbjct 1619494 TCCTGTAAGAGTCTTCACAAAGATCTGCATA 1619524 >seq504 Length=327254 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||| || |||||||| ||| | | |||| | ||||| |||||||| || || ||| Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 | | | || ||||| || || | || |||||||| |||||| || | ||| Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTT 214223 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | ||||||| || |||||| || || || || | ||| ||||||| ||||||||||| Sbjct 214224 CAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAA 214283 Query 27238 AGATTTGCATA 27248 | ||||||||| Sbjct 214284 AAATTTGCATA 214294 >seq126 Length=1333976 Score = 105 bits (116), Expect = 6e-18 Identities = 157/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 130756 AATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTC 130815 ||| | |||||| || |||| | ||| | ||| ||| || || | || |||||||| Sbjct 1331852 AATTACTTGAAATTCTCCAGATAAGACCCTTCTTGTGTACATATTTGTAGTAAACGGTTC 1331911 Query 130816 AAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAA 130875 ||| ||||| |||||||| | ||| || ||||||| || || ||||| ||| | || Sbjct 1331912 AAATGATTCATTGTTGCCAAGTATCTGCGCTGTAGAAGCTGTAGGCATTGGTGCTAGTAG 1331971 Query 130876 TAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAG 130935 | ||||| | ||||| || | |||||||||||||| || ||| ||||| || Sbjct 1331972 CAAGGAATTTCTCAGACCATGTTCGGCAATTTTTCGCTTCAAAGCAGTCCAGTCCCAGAG 1332031 Query 130936 AGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTAT 130977 | ||| ||| | ||| |||||||| ||| | |||| ||| Sbjct 1332032 TGTGGTTGGTGTTACA---TTCCACATGTCATACTGTAATAT 1332070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424848756729144