Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_027993.1 Length=43587 Score E Sequences producing significant alignments: (Bits) Value seq1601 131 5e-26 seq10505 125 2e-24 seq2192 125 2e-24 >seq1601 Length=30922 Score = 131 bits (144), Expect = 5e-26 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 26643 GATGGCATTGCCGTAACCGCGCAATCGTCCCACTCTTGCGGGTATCCCATTAGCCAGCGG 26702 || || ||| ||||| |||||| |||||||||||| || ||||||| ||||||||| Sbjct 14754 GAGGGTATTACCGTAGGCGCGCAGTCGTCCCACTCTGTTGGTAATCCCATCAGCCAGCGG 14813 Query 26703 GAATGCGCCGGGTTCAACCGGCCGGAACTTTCCATCACGGCATCCGAGCCAGTCAGCATC 26762 | || |||||||||||| ||||| | |||||||| ||||| | |||||||||||| || Sbjct 14814 GCGTGTGCCGGGTTCAACTGGCCGCCATTTTCCATCCCGGCAGCAGAGCCAGTCAGCCTC 14873 Query 26763 TGACCAGAAGCCGTG 26777 | |||||||||||| Sbjct 14874 TCGCCAGAAGCCGTG 14888 >seq10505 Length=1270 Score = 125 bits (138), Expect = 2e-24 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 26643 GATGGCATTGCCGTAACCGCGCAATCGTCCCACTCTTGCGGGTATCCCATTAGCCAGCGG 26702 ||| || || ||||| |||||| ||||||||| | || | ||||| ||||||||| Sbjct 500 GATAGCGTTTCCGTAGGCGCGCAGTCGTCCCACGCGGTTGGTAACCCCATAAGCCAGCGG 441 Query 26703 GAATGCGCCGGGTTCAACCGGCCGGAACTTTCCATCACGGCATCCGAGCCAGTCAGCATC 26762 |||||||||||||||||| ||||| ||||| |||| ||||| |||||||||||| || Sbjct 440 GAATGCGCCGGGTTCAACTGGCCGCCACTTTTCATCCCGGCACAGGAGCCAGTCAGCCTC 381 Query 26763 TGACCAGAAGCCGT 26776 | ||||||||||| Sbjct 380 TCGCCAGAAGCCGT 367 >seq2192 Length=16777 Score = 125 bits (138), Expect = 2e-24 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26643 GATGGCATTGCCGTAACCGCGCAATCGTCCCACTCTTGCGGGTATCCCATTAGCCAGCGG 26702 ||| || || ||||| |||||| ||||||||| | || | ||||| ||||||||| Sbjct 16279 GATAGCGTTTCCGTAGGCGCGCAGTCGTCCCACGCGGTTGGTAACCCCATAAGCCAGCGG 16338 Query 26703 GAATGCGCCGGGTTCAACCGGCCGGAACTTTCCATCACGGCATCCGAGCCAGTCAGCATC 26762 |||||||||||||||||| ||||| ||||| |||| ||||| |||||||||||| || Sbjct 16339 GAATGCGCCGGGTTCAACTGGCCGCCACTTTTCATCCCGGCACAGGAGCCAGTCAGCCTC 16398 Query 26763 TGACCAGAAGCCGT 26776 | ||||||||||| Sbjct 16399 TCGCCAGAAGCCGT 16412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139329433547106