Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_027994.1 Length=41632 Score E Sequences producing significant alignments: (Bits) Value seq1601 136 1e-27 seq10505 129 2e-25 seq2192 129 2e-25 >seq1601 Length=30922 Score = 136 bits (150), Expect = 1e-27 Identities = 111/135 (82%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 25029 GATGGCATTGCCGTAACCGCGCAATCGTCCCACTCTGGCGGGTATCCCATTAGCCAGCGG 25088 || || ||| ||||| |||||| ||||||||||||| || ||||||| ||||||||| Sbjct 14754 GAGGGTATTACCGTAGGCGCGCAGTCGTCCCACTCTGTTGGTAATCCCATCAGCCAGCGG 14813 Query 25089 GAATGCGCCGGGTTCAACCGGCCGGAACTTTCCATCACGGCATCCGAGCCAGTCAGCATC 25148 | || |||||||||||| ||||| | |||||||| ||||| | |||||||||||| || Sbjct 14814 GCGTGTGCCGGGTTCAACTGGCCGCCATTTTCCATCCCGGCAGCAGAGCCAGTCAGCCTC 14873 Query 25149 TGACCAGAAGCCGTG 25163 | |||||||||||| Sbjct 14874 TCGCCAGAAGCCGTG 14888 >seq10505 Length=1270 Score = 129 bits (142), Expect = 2e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25029 GATGGCATTGCCGTAACCGCGCAATCGTCCCACTCTGGCGGGTATCCCATTAGCCAGCGG 25088 ||| || || ||||| |||||| ||||||||| | | || | ||||| ||||||||| Sbjct 500 GATAGCGTTTCCGTAGGCGCGCAGTCGTCCCACGCGGTTGGTAACCCCATAAGCCAGCGG 441 Query 25089 GAATGCGCCGGGTTCAACCGGCCGGAACTTTCCATCACGGCATCCGAGCCAGTCAGCATC 25148 |||||||||||||||||| ||||| ||||| |||| ||||| |||||||||||| || Sbjct 440 GAATGCGCCGGGTTCAACTGGCCGCCACTTTTCATCCCGGCACAGGAGCCAGTCAGCCTC 381 Query 25149 TGACCAGAAGCCGT 25162 | ||||||||||| Sbjct 380 TCGCCAGAAGCCGT 367 >seq2192 Length=16777 Score = 129 bits (142), Expect = 2e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25029 GATGGCATTGCCGTAACCGCGCAATCGTCCCACTCTGGCGGGTATCCCATTAGCCAGCGG 25088 ||| || || ||||| |||||| ||||||||| | | || | ||||| ||||||||| Sbjct 16279 GATAGCGTTTCCGTAGGCGCGCAGTCGTCCCACGCGGTTGGTAACCCCATAAGCCAGCGG 16338 Query 25089 GAATGCGCCGGGTTCAACCGGCCGGAACTTTCCATCACGGCATCCGAGCCAGTCAGCATC 25148 |||||||||||||||||| ||||| ||||| |||| ||||| |||||||||||| || Sbjct 16339 GAATGCGCCGGGTTCAACTGGCCGCCACTTTTCATCCCGGCACAGGAGCCAGTCAGCCTC 16398 Query 25149 TGACCAGAAGCCGT 25162 | ||||||||||| Sbjct 16399 TCGCCAGAAGCCGT 16412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133074662080836