Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3969 118 1e-21 >seq3969 Length=6340 Score = 118 bits (130), Expect = 1e-21 Identities = 256/377 (68%), Gaps = 16/377 (4%) Strand=Plus/Plus Query 14059 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 14118 || ||| ||||| || || || || || | || |||||| | ||| ||||| || Sbjct 1651 CTGACGGTCAAAACGGCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGT 1710 Query 14119 CGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTG 14178 || || || || | ||||| | | ||||| |||||||||||| || | || Sbjct 1711 GGCGGCAATCACGATAATGCCTTCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTG 1770 Query 14179 ATTGATGGTTTGTTCGCGTTCATCATTCGCA-GGCATACCACCCGCACTGCGTTGCTTAC 14237 || | ||||||||| |||||||||| || || | |||||||| ||||| || Sbjct 1771 GTTCAGGGTTTGTTCACGTTCATCATGACCACCGCCCA-GACCCGCACCACGTTGGCGAC 1829 Query 14238 CGACGGCGTCAATTTCATCGATGAAAACGATACATGG------TTGATTTTCACGGGCAA 14291 ||||||| || |||||||| ||||| | |||||| || || ||||| | || Sbjct 1830 CGACGGCATCGATTTCATCAATGAAGATGATACAAGGCGCGGCTT--TTTTCGCCTGC-- 1885 Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351 || || || || ||||| | |||||||||||||| |||||||| ||||| | | Sbjct 1886 --TCGAACATGTCACGCACACGAGATGCACCGACACCCACGAACATCTCAACAAAGTCAG 1943 Query 14352 CGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGG 14410 ||||| || | || || || || || | |||||| || || || ||| || ||| Sbjct 1944 AACCGGAA-ATGGTGAAAAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGG 2002 Query 14411 GTCTTCCCCGTCCCTGG 14427 ||||| || || || || Sbjct 2003 GTCTTACCTGTTCCCGG 2019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618307361713720