Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq57 116 2e-21
seq504 98.7 6e-16
>seq57
Length=2082711
Score = 116 bits (128), Expect = 2e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||||||||| | || ||||| || ||| |||||||||||| || ||||| ||
Sbjct 1620437 CCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1620496
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | ||||| | || || || ||||| || | |||||| || || || ||
Sbjct 1620497 AGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGG 1620556
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| ||| ||||| || ||| || ||||| | ||| || || | |||||||
Sbjct 1620557 ATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACT 1620616
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || ||||| || || | |||||||||||||| |||||
Sbjct 1620617 TCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||||||||| | || ||||| || ||| |||||||||||| || ||||| ||
Sbjct 1619069 CCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1619128
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | ||||| | || || || ||||| || | |||||| || || || ||
Sbjct 1619129 AGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGG 1619188
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||| || ||| ||| | |||||| | ||| || || | ||| ||
Sbjct 1619189 ATTCCTTCCTTATCCTGGAT-TTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAAC 1619247
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| || || | |||||||| ||||| |||||
Sbjct 1619248 TTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295
Score = 100 bits (110), Expect = 2e-16
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| ||||| | |||||||| | ||| ||| || || || || ||||| ||
Sbjct 1620209 CCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGAC 1620268
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | ||||| | || || || ||||| || || | |||||| || || ||
Sbjct 1620269 AGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGA 1620328
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCT--TCGCTCTCC 34656
| || || || ||| ||| ||| | ||| || | |||||| || | | |||
Sbjct 1620329 ATACCTTCTTTATCT-TGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCT-- 1620385
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| | ||| || ||||| |||||||||||||| || || ||||||||
Sbjct 1620386 ACTTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
||| || |||||||||||||| ||||| ||||| | ||||| | ||||| || || ||
Sbjct 1618876 CTCTTTCTGAATGTTATAATCAGAAAGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAA 1618935
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634
|| || | || || || || || | ||| ||||| ||| ||||| |||||
Sbjct 1618936 AATCAACCTTTGCTGATCGGGAGGGATTCCTTCCTTATCTTGAATCTTAGCTTTTACATT 1618995
Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
| |||||| || || ||||| | ||| |||||||| || ||||| ||||||||
Sbjct 1618996 TTCAATTGTATCAGAAGGTTCTACTTCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCAC 1619055
Query 34695 AAAAATCTGCAT 34706
|| ||||||||
Sbjct 1619056 GAATATCTGCAT 1619067
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || || | |||||||| || ||| |||||||||||| || ||||| ||
Sbjct 1619525 CCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1619584
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | ||||| | || || || ||||| || | |||||| || || || ||
Sbjct 1619585 AGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGA 1619644
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| || || || ||| ||| | || ||| | ||||| || ||| ||
Sbjct 1619645 ATTCCTTCTTTATCCTGGAT-TTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAAC 1619703
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| || || | |||||||||||||| |||||
Sbjct 1619704 TTCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||| ||||| ||||||||||| | || || | ||||| | |||||| || || ||
Sbjct 1618649 TCCTTCTGAATATTATAATCTGACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAA 1618708
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GA 34634
|| || | || ||||| || || | ||| ||||||||| ||| ||| | ||| ||
Sbjct 1618709 ATCAACCTTTGCTGGTCAGGTGGTATTCCTTCCTTGTCT-TGAATTTTCGCTTTCACATT 1618767
Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
| ||| ||||| || ||||| | || || ||||| || || || ||||||||
Sbjct 1618768 TTCAATAGTGTCAGATGGTTCAACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCAC 1618827
Query 34695 AAAAATCTGCAT 34706
||| || |||||
Sbjct 1618828 AAATATTTGCAT 1618839
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | || | ||| ||||| || || ||||| ||||||||||||
Sbjct 1620665 CCTCCTCTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAA 1620724
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | || || ||||| || ||||| | |||||||| || ||
Sbjct 1620725 AGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTGGA 1620784
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| || || || ||| ||| | || ||| | ||||| ||| ||| ||
Sbjct 1620785 ATTCCTTCTTTATCCTGGAT-TTTAGCCTTTACGTTCTCTATTGTATCTGACGGCTCAAC 1620843
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| || || | ||||| |||||||| |||||
Sbjct 1620844 TTCAAGAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCAT 1620891
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | || | ||| ||||| || || ||||| ||||||||||||
Sbjct 1620893 CCTCCTCTTAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAA 1620952
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | || || ||||| || ||||| | |||||||| |||||
Sbjct 1620953 AGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTGGCGGA 1621012
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||| || || ||| ||| ||| | ||||| | |||||||| || ||
Sbjct 1621013 ATTCCTTCTTTATCT-TGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAAC 1621071
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || |||||||| || || | || || || || ||||||||
Sbjct 1621072 TTCAAGTGTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCAT 1621119
>seq504
Length=327254
Score = 98.7 bits (108), Expect = 6e-16
Identities = 141/195 (72%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 34517 CCTTT-TGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||| || || || ||||| ||||| || || | ||||| || ||||| || |||||
Sbjct 214103 CCTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAA 214162
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| || | || || || || || | ||| || || ||| ||||||| | ||||| |
Sbjct 214163 ATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTT-GCCTTAACATT 214221
Query 34636 AA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
|||||||||| | || || || | ||| || |||||||| || || ||||||||
Sbjct 214222 TTCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCAC 214281
Query 34695 AAAAATCTGCATGTT 34709
|||||| ||||| ||
Sbjct 214282 AAAAATTTGCATATT 214296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314666167921121
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