Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq57 161 9e-35 seq504 107 2e-18 seq152 84.2 2e-11 >seq57 Length=2082711 Score = 161 bits (178), Expect = 9e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| |||||| |||| || || | |||||||||||||| ||||| || Sbjct 1618839 ATGCAAATATTTGTGAAAACTTTGACTGGAAAAACCATTACTCTTGAAGTTGAACCATCT 1618780 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||||||||||| ||||| |||||||| || || Sbjct 1618779 GACACTATTGAAAATGTGAAAGCGAAAATTCAAGACAAGGAAGGAATACCACCTGACCAG 1618720 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || |||||||||||||| || ||| | || ||||| || Sbjct 1618719 CAAAGGTTGATTTTCGCAGGGAAACAATTGGAAGATGGTCGCACCTTGTCAGATTATAAT 1618660 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||| || || |||||| | || || | ||||| || || Sbjct 1618659 ATTCAGAAGGAATCAACTTTACATCTAGTACTGAGATTGCGTGGCGG 1618613 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||||||||| || || |||||||||||||||| || ||||| Sbjct 1619751 ATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCT 1619692 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || || ||||| || || |||||||| || ||||| ||||| Sbjct 1619691 GATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCAG 1619632 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || || ||||| | || | || |||||||| Sbjct 1619631 CAGCGTCTTATTTTTGCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAAT 1619572 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||||||||| ||| | ||||||||| Sbjct 1619571 ATTCAAAAGGAGTCCACCCTTCATTTGGTT 1619542 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||||||||| || || | ||||||||||||||||| || || Sbjct 1620663 ATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTCT 1620604 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| || || || ||||| || ||||| ||||| Sbjct 1620603 GATACTATTGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAG 1620544 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || |||||||| | || | || |||||||| Sbjct 1620543 CAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAAT 1620484 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| ||| | ||||| ||| | ||| | | ||||| || Sbjct 1620483 ATTCAAAAGGAGTCCACCCTTCATTTAGTTCTTCGTCTTAGAGGTGGTAT 1620434 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| |||| || ||| | || ||||||||||| || || || Sbjct 1621347 ATGCAGATCTTCGTAAAAACGTTGACGGGGAAGACAATAACTCTTGAAGTTGAGCCTTCA 1621288 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || ||||||||||| || ||||| || || || ||||| Sbjct 1621287 GATACTATTGAAAACGTAAAGGCTAAAATTCAAGATAAGGAAGGAATCCCTCCTGATCAG 1621228 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || ||||| | || || || || |||||||| || ||| | ||||||||||| Sbjct 1621227 CAACGATTAATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGTACCCTATCCGATTACAAT 1621168 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||| || || ||||||||| Sbjct 1621167 ATACAGAAGGAGTCCACGTTGCATTTGGTT 1621138 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||||||||| || || | |||||||||||||| || || || Sbjct 1619295 ATGCAAATTTTCGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTCT 1619236 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| || || || ||||| || ||||| ||||| Sbjct 1619235 GATACTATTGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAG 1619176 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || |||||||| | || | || |||||||| Sbjct 1619175 CAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAAT 1619116 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| ||| | ||||| ||| | ||| | | ||||| || Sbjct 1619115 ATTCAAAAGGAGTCCACCCTTCATTTAGTTCTTCGTCTTAGAGGTGGTAT 1619066 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || ||||| | ||||| || | || || | ||||| ||||| || Sbjct 1620435 ATGCAGATATTCGTCAAAACGTTAACCGGAAAAACCATCACCTTAGAAGTAGAACCATCT 1620376 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||||||||| |||||||| || ||||| |||||| Sbjct 1620375 GATACAATTGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 1620316 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || ||||| || |||||||| || || | || |||||||| Sbjct 1620315 CAGAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACACTGTCTGATTACAAT 1620256 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || || ||||||||| | ||| | | ||||| || Sbjct 1620255 ATACAGAAAGAGTCCACGTTGCATTTGGTTCTTCGTCTCAGAGGTGGAAT 1620206 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || | || || ||| | ||||| | |||||||||||||| Sbjct 1619979 ATGCAGATATTTGTTAAGACCTTAACTGGAAAGACCATTACCTTAGAAGTGGAACCGTCT 1619920 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || ||| ||||||||||| |||||||| || ||||| |||||| Sbjct 1619919 GACACGATAGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 1619860 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || ||||| || |||||||| || || | || || ||||| Sbjct 1619859 CAGAGATTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACTCTGTCTGACTACAAT 1619800 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 || || || || || || |||||| Sbjct 1619799 ATCCAGAAAGAATCTACTTTACAT 1619776 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| |||||||||||||||| ||||| || Sbjct 1620207 ATGCAGATCTTCGTTAAGACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAACCTTCT 1620148 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || |||||||| || ||||| |||||||| || || Sbjct 1620147 GACACAATTGAAAATGTAAAAGCGAAGATTCAAGATAAGGAAGGAATACCACCTGACCAG 1620088 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || ||||| || ||||| | ||| |||| |||||||| Sbjct 1620087 CAAAGGTTGATTTTCGCTGGGAAACAGTTAGAAGATGGGCGCACCCTTTCTGATTACAAT 1620028 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||| || || || || Sbjct 1620027 ATTCAGAAAGAATCAAC 1620011 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| ||||| || || |||||||||||||||| || ||||| Sbjct 1620891 ATGCAAATTTTTGTAAAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCA 1620832 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || || ||||| || || |||||||| || |||||||| ||| Sbjct 1620831 GATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCAA 1620772 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | |||||| || || || ||||| | || |||| ||||| || Sbjct 1620771 CAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAAT 1620712 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| || || || || ||||| Sbjct 1620711 ATTCAGAAAGAATCTACTCTACAT 1620688 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || |||||| | || || || | ||||| | ||||| ||||| || Sbjct 1619067 ATGCAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCT 1619008 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| || |||||||| || ||||| || || |||||||| Sbjct 1619007 GATACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAG 1618948 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || ||||| |||||||| || || |||| ||||| ||| Sbjct 1618947 CAAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAAC 1618888 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| || ||||| || || ||| Sbjct 1618887 ATTCAGAAAGAGTCAACATTGCAT 1618864 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || ||| | ||||| |||||||| ||||| || Sbjct 1619523 ATGCAGATCTTTGTGAAGACTCTTACAGGAAAGACCATTACACTTGAAGTTGAACCATCT 1619464 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||||||||| |||||||| || ||||| || ||| Sbjct 1619463 GACACTATCGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAA 1619404 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | |||||| || || | ||||| | || | || ||||| || Sbjct 1619403 CAAAGGTTAATCTTCGCCGGAAAGCAGCTAGAAGATGGCCGCACTCTCTCAGATTATAAT 1619344 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 || || || || || || ||||| Sbjct 1619343 ATCCAGAAAGAATCAACTCTACAT 1619320 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || || | ||||| |||||||| ||||| || Sbjct 1621119 ATGCAGATCTTCGTCAAGACCCTTACAGGAAAAACGATTACACTTGAAGTTGAACCTTCT 1621060 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||||||||| |||||||| || || || || ||| Sbjct 1621059 GACACAATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCGCCAGACCAA 1621000 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | |||||| || || || ||||| | || |||| ||||| || Sbjct 1620999 CAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAAT 1620940 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| || || || || ||||| Sbjct 1620939 ATTCAGAAAGAATCTACTCTACAT 1620916 >seq504 Length=327254 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 26969 ATTTTTTA-ATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTA 27027 |||||||| || | || ||||| || ||||| |||||| |||| || || | |||| Sbjct 214313 ATTTTTTAGATCTTTAAAATATGCAAATTTTTGTGAAAACTTTGACGGGTAAAACAATTA 214254 Query 27028 CTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAG 27087 | ||||| || ||||| || ||| | ||||| | || || ||| || ||||| |||| Sbjct 214253 CCCTTGAGGTTGAACCCTCAGACACAATTGAAAATGTTAAGGCAAAGATCCAAGATAAAG 214194 Query 27088 AAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTT 27147 |||| || || || ||||| || | || || | || |||||||| | ||||| | Sbjct 214193 AAGGAATTCCTCCAGATCAGCAAAGATTGATTTTTGCTGGCAAACAGCTAGAAGATGGAC 214134 Query 27148 CGACCGTTTCCGATTACAACATTCA-AAAGG 27177 ||| ||||||||||||| || || ||||| Sbjct 214133 GCACCCTTTCCGATTACAATATCCAGAAAGG 214103 >seq152 Length=1173123 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 135649 AGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTT 135708 ||||||||||||||| || || ||| | || |||||||| |||| || | || | || Sbjct 624220 AGGTTGTATGTGGTCAATCTGTGGTATTCATGATCAAGGTTGGAGAGAAAGAGAAATATT 624161 Query 135709 TGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGT 135759 ||||||||| || |||||||| || || || |||| | | || ||| |||| Sbjct 624160 TGGCAAGATACGTTATATGAATTACGAAGGATGTAGACGTAAGTTTGATGT 624110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434828496930240