Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq2617 100 3e-16 >seq2617 Length=13952 Score = 100 bits (110), Expect = 3e-16 Identities = 200/294 (68%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 129154 TTTTTGAATCCAACAGCCATAGGTAATCCTGAAGCAATTTCACGATGGGTCTGTGATTCT 129213 || ||||| || || | ||| | | || ||||| ||||| || || || || ||||| Sbjct 6198 TTCTTGAAACCCACTGGCATCGAAAGGCCAGAAGCCATTTCGCGGTGCGTTTGCGATTCA 6257 Query 129214 GTAGTACGAGCACCAATAGCGACCCAACTAAAAATACCTGATAGATACTTAATAGTAAAT 129273 || || || |||||||| || |||||| || | | | ||||| | | | Sbjct 6258 GTGGTCCGCGCACCAATCGCTGACCAACTGAACAGATCGCCCAGATATTGTGGACTGTTG 6317 Query 129274 GGGTCCAAGACCTCTGTCGCCAAAGGAAGTCCAAGATTCAATAGTTCTAAACAG-AGATG 129332 || ||||| | |||||||||||||| || || | |||| | | || ||| || | Sbjct 6318 GGATCCAACGCTTCTGTCGCCAAAGGCAGCCCCATGTTCACCAAGTTTAG-CAGCAGCTC 6376 Query 129333 GCGGGCAATTCTTAACCCTTCATCAATATTAAAAGAACCATTTAATTCTGGGTCGTTGAC 129392 || ||||| |||||| | || | | || || |||| | | ||||| |||| Sbjct 6377 ACGTGCAATGTGTAACCCCGCCTCCACGTCGAAGGAGCCATCCATGTAGGGGTCATTGAT 6436 Query 129393 TAGGCCTTTCCAACCTACAGTTGTGCGTGGTTTTTCAAAATAAACCCGCATAAC 129446 || ||||||||||||||||| || || ||||||||| | ||||| ||||| || Sbjct 6437 AAGACCTTTCCAACCTACAGTAGTACGCGGTTTTTCAGAGTAAACGCGCATTAC 6490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518129673975480