Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq3289 100 9e-17 >seq3289 Length=8908 Score = 100 bits (110), Expect = 9e-17 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 39081 GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGAT 39140 |||||||| ||| | ||| ||||| || ||||| || ||||| ||||| |||||||| | Sbjct 6216 GAAGTCGACGTCGAAGTCAGGCATCGACACACGTTCCGGGTTGAGGAAACGCTCGAACAG 6157 Query 39141 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39200 || | | || || || |||||||| || | ||| || |||||||||| Sbjct 6156 CAGGTCAAATTCAAGCGGATCGAGATCGGTGATTTTCAGTGAGTAGGCCACCAGCGAGCC 6097 Query 39201 AGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAA 39260 || | || |||||||| || || ||| || |||| || || | ||| ||| || Sbjct 6096 TGCACCCGAACCGCGCCCCGGACCTACCGGGACATCGTTGTCTTTTGACCACTGGATAAA 6037 Query 39261 GTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGAT 39305 || |||| |||||||| |||||||||||||||||||| Sbjct 6036 CTCCATCACGATCAGGAAGTAGCCAGGGAACCCCATCTGGTTGAT 5992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159683835628134