Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq4705 116 8e-22 >seq4705 Length=4822 Score = 116 bits (128), Expect = 8e-22 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 32354 GTAAAACCCGATTTACCTGACGGACAAGCAGTACATGTTTTGAGGCATACATTTGCCACA 32413 ||||| |||||| ||||| | ||||| |||| ||||| || | ||||| ||||| || Sbjct 1109 GTAAAGCCCGATCTACCTAAAGGACAGTCAGTGCATGTGCTGCGTCATACCTTTGCTGCA 1168 Query 32414 CATTTTATAATGAATGGAGGTAACATAATCACATTGCAGCGCATCCTGGGTCATTCTAAC 32473 ||||| || ||||| ||||| || || | || |||| || |||| || || Sbjct 1169 CATTTCATTATGAACGGAGGAAATATTCTGACGCTGCAAAAAATTATGGGCCACGCTTCA 1228 Query 32474 ATTCAGCAAACTATGACCTACGCACACTTTGCACCGGATTTCTTACAAGATGCTGTGACT 32533 || ||||||||||||||||||||||| |||| || |||| ||||| ||||| | || Sbjct 1229 ATCCAGCAAACTATGACCTACGCACATCTTGCTCCTGATTATTTACAGGATGCGATAACC 1288 Query 32534 CTTAACCCAGTG 32545 |||| ||| || Sbjct 1289 TTTAATCCACTG 1300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104417890713378