Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq3289 95.1 4e-15 >seq3289 Length=8908 Score = 95.1 bits (104), Expect = 4e-15 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 39514 GAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGAT 39573 |||||||| ||| | ||| ||||| || || || || ||||| ||||| |||||||| | Sbjct 6216 GAAGTCGACGTCGAAGTCAGGCATCGACACACGTTCCGGGTTGAGGAAACGCTCGAACAG 6157 Query 39574 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39633 || | | || || || |||||||| || | ||| || |||||||||| Sbjct 6156 CAGGTCAAATTCAAGCGGATCGAGATCGGTGATTTTCAGTGAGTAGGCCACCAGCGAGCC 6097 Query 39634 AGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCCCAGCCGATGAA 39693 || | || || ||||| || || ||| ||| |||| || || | ||| ||| || Sbjct 6096 TGCACCCGAACCGCGCCCCGGACCTACCGGGACATCGTTGTCTTTTGACCACTGGATAAA 6037 Query 39694 GTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGAT 39738 || |||| |||||||| |||||||||||||||||||| Sbjct 6036 CTCCATCACGATCAGGAAGTAGCCAGGGAACCCCATCTGGTTGAT 5992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160208532569550