Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_028995.1 Length=43216 Score E Sequences producing significant alignments: (Bits) Value seq6242 84.2 6e-12 >seq6242 Length=2873 Score = 84.2 bits (92), Expect = 6e-12 Identities = 81/103 (79%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 1893 ATTTTCAGGC-GATCAAGGTAAACGAGATAGTATTGTTGTTGTAGCGCAATTATCTCCTG 1951 ||||| ||| || |||||||| || || || || ||||||| || ||| | || || | Sbjct 485 ATTTTGAGGGTGAACAAGGTAAGCGTGACAGCATCATTGTTGTCGCCCAACTTTCCCCCG 426 Query 1952 AATTTACAGCAAGATTAGTAGATCGGTGGCAAGAGCTAGAAAA 1994 ||||||| || |||||||||||||| ||||| || || ||||| Sbjct 425 AATTTACCGCCAGATTAGTAGATCGTTGGCAGGAACTGGAAAA 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138142466685732