Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_029013.1
Length=177688
Score E
Sequences producing significant alignments: (Bits) Value
seq2248 140 4e-28
>seq2248
Length=16282
Score = 140 bits (154), Expect = 4e-28
Identities = 294/436 (67%), Gaps = 8/436 (2%)
Strand=Plus/Plus
Query 75994 CTGCACCGTCGCGGGTGTTGTGATAATACAGAGTTTTCACGCCGTAGTAGTTCGCATAAA 76053
|||||||||| |||||||| ||||||||||| ||||||| ||| | | | || ||
Sbjct 90 CTGCACCGTCACGGGTGTTTTGATAATACAGCGTTTTCAACCCGAACTTATAGGCGGTAA 149
Query 76054 GCAGGTCA-TCAATGATGGTTTCAGATTTCACTTTACCATCTGGGAAGTTAGCCGGATCA 76112
||| |||| ||| | |||||| |||||| || |||||| ||||||||
Sbjct 150 GCAAGTCAGTCAGCAACTGTTTCATCGG-CACTTTTCCTGACGGGAAGCGCGCCGGATCG 208
Query 76113 TAGTTGGTGTTTGCAGAGATCGCTTGATCAACAAACTTCTGCATAACAGCAACATGAGAC 76172
||||||||||| ||||| || || ||||| |||||||||||||| | |||| | |
Sbjct 209 TAGTTGGTGTTGGCAGAAATAGCCTGATCGACAAACTTCTGCATCAGCCCAACCAGTTGC 268
Query 76173 AGATAACCTTTATTACCGCGTTTTGCCATTGTCCAGAGATAATCATAGAAATCAATCTGG 76232
|| || || | ||| || | |||| ||| || | || ||| ||| || ||
Sbjct 269 AGGTAGCCGTCATT------GTTCGGCATTTCCCACAGTAATTCGTAGGCATCCTTCAGG 322
Query 76233 TCGTTCTGGTTCGGTACTACCTGGTTGAATGAACCTTCTTTCGAAGATTTCACACTCACA 76292
|| | | ||| || |||||| || || ||||| || | || | ||| |
Sbjct 323 GTTTTGTAATCCGGCACCACCTGGCGCAAAATGCCGTCTTTTGACGCCTTGATACTGATG 382
Query 76293 GGGCCGCGAGGCGGTTCAATCCCGTTTGTTGAGTTGCTTACTTGAGAACTACTCTCACAT 76352
| ||||| || ||||| || ||||| || | |||| | ||| || | || |
Sbjct 383 TGACCGCGTGGTGGTTCGATACCGTTGGTGGCGTTGGAAATTTGTGACGAGGTTTCCGAC 442
Query 76353 GGCATTAAAGCAGAAAGAGTTGAGTTACGCAAGCCATATTTTTTGATTTCGCCGCGCAAC 76412
||||| || ||||| || || |||||||||| || | | ||||||| | ||||||
Sbjct 443 GGCATCAACGCAGAGAGCGTGGAGTTACGCAGACCGTGTGTTTTGATACTGTCGCGCAGT 502
Query 76413 CATTCCCAATCGCAAT 76428
|||||||||| |||
Sbjct 503 GCTTCCCAATCGTAAT 518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568356089400960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |