Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq2248 140 4e-28 >seq2248 Length=16282 Score = 140 bits (154), Expect = 4e-28 Identities = 294/436 (67%), Gaps = 8/436 (2%) Strand=Plus/Plus Query 75994 CTGCACCGTCGCGGGTGTTGTGATAATACAGAGTTTTCACGCCGTAGTAGTTCGCATAAA 76053 |||||||||| |||||||| ||||||||||| ||||||| ||| | | | || || Sbjct 90 CTGCACCGTCACGGGTGTTTTGATAATACAGCGTTTTCAACCCGAACTTATAGGCGGTAA 149 Query 76054 GCAGGTCA-TCAATGATGGTTTCAGATTTCACTTTACCATCTGGGAAGTTAGCCGGATCA 76112 ||| |||| ||| | |||||| |||||| || |||||| |||||||| Sbjct 150 GCAAGTCAGTCAGCAACTGTTTCATCGG-CACTTTTCCTGACGGGAAGCGCGCCGGATCG 208 Query 76113 TAGTTGGTGTTTGCAGAGATCGCTTGATCAACAAACTTCTGCATAACAGCAACATGAGAC 76172 ||||||||||| ||||| || || ||||| |||||||||||||| | |||| | | Sbjct 209 TAGTTGGTGTTGGCAGAAATAGCCTGATCGACAAACTTCTGCATCAGCCCAACCAGTTGC 268 Query 76173 AGATAACCTTTATTACCGCGTTTTGCCATTGTCCAGAGATAATCATAGAAATCAATCTGG 76232 || || || | ||| || | |||| ||| || | || ||| ||| || || Sbjct 269 AGGTAGCCGTCATT------GTTCGGCATTTCCCACAGTAATTCGTAGGCATCCTTCAGG 322 Query 76233 TCGTTCTGGTTCGGTACTACCTGGTTGAATGAACCTTCTTTCGAAGATTTCACACTCACA 76292 || | | ||| || |||||| || || ||||| || | || | ||| | Sbjct 323 GTTTTGTAATCCGGCACCACCTGGCGCAAAATGCCGTCTTTTGACGCCTTGATACTGATG 382 Query 76293 GGGCCGCGAGGCGGTTCAATCCCGTTTGTTGAGTTGCTTACTTGAGAACTACTCTCACAT 76352 | ||||| || ||||| || ||||| || | |||| | ||| || | || | Sbjct 383 TGACCGCGTGGTGGTTCGATACCGTTGGTGGCGTTGGAAATTTGTGACGAGGTTTCCGAC 442 Query 76353 GGCATTAAAGCAGAAAGAGTTGAGTTACGCAAGCCATATTTTTTGATTTCGCCGCGCAAC 76412 ||||| || ||||| || || |||||||||| || | | ||||||| | |||||| Sbjct 443 GGCATCAACGCAGAGAGCGTGGAGTTACGCAGACCGTGTGTTTTGATACTGTCGCGCAGT 502 Query 76413 CATTCCCAATCGCAAT 76428 |||||||||| ||| Sbjct 503 GCTTCCCAATCGTAAT 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568356089400960