Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_029015.2
Length=33509
Score E
Sequences producing significant alignments: (Bits) Value
seq1601 239 1e-58
seq2 132 1e-26
seq10505 127 4e-25
seq2192 127 4e-25
seq81 120 7e-23
seq8600 84.2 5e-12
>seq1601
Length=30922
Score = 239 bits (264), Expect = 1e-58
Identities = 362/504 (72%), Gaps = 12/504 (2%)
Strand=Plus/Minus
Query 27567 GCCTATTACAACGAAATCGATCCCTTCGCCGCGCAATGGCTGCGCAACCTGATCGACGCT 27626
|||| || ||||| | || |||| | | ||| |||||||| |||||||| | |||
Sbjct 15614 GCCTGGTATAACGACACTGACCCCTATGTGGGGCAGTGGCTGCGAAACCTGATGGCCGCC 15555
Query 27627 GGGCACATCGCCCCGGGCGTCGTTGACACTCGCTCAATTGAGGA-AGTAACCGCAAATGA 27685
||||| || || || || | || || || ||||| ||||| | ||| | | | |||
Sbjct 15554 GGGCATATTGCGCCTGGTGATGTCGATGAACGTTCAATCGAGGAGATTAAACCCGA-TGA 15496
Query 27686 CCTTAAAG-GATTCACGCAATGCCACTTCTTTGCCGGGATCGGTGTGTGGTCTTACGCCC 27744
||| || | | ||| || || || ||||| ||||| ||||| ||||| |||||||
Sbjct 15495 G-TTACAGAGCTACACCCAGTGTCATTTCTTCGCCGGAATCGGCACCTGGTCATACGCCC 15437
Query 27745 TGCGCCGCGCAGGATGGCCCGATGATCGCCCCGTCTGGACAGGTTCATGCCCCTGCCAGC 27804
|||| | | |||||||||||| ||||| |||||||| || || |||||||
Sbjct 15436 TGCGAAAAGTGTGCTGGCCCGATGATAAACCCGTGTGGACAGGCAGTTGTCCGTGCCAGC 15377
Query 27805 CTTTCAGCGCCTGC-GGAAAGCGACAGGGATTTG---ACGATCCCCGCCATCATTGGCCC 27860
|||||||| || || || ||| || ||||||||| |||| | ||| | || |||||
Sbjct 15376 CTTTCAGC-CCGGCAGGCAAGGGAAAGGGATTTGCTGACGAGCGGCGC--TTAT-GGCCC 15321
Query 27861 TCATGGGGTCACCTTATTAAGGTGTGTGCGCCTCACGTTGTCTTTGGGGAACAGGTTGCA 27920
| | ||||| || || ||| ||| ||||| ||||||| || |||||||||
Sbjct 15320 GCGTTCTTCCACCTCATCCAGCAGTGCAAACCTGACGTTATCTTTGGTGAGCAGGTTGCA 15261
Query 27921 AGCAAAGACGGCCTCGCATGGCTCGACGCTGTACAGGCTGATCTGGAAAACGCGGATTAT 27980
||| ||||| ||||| ||||||||| ||||||| ||| |||||| | | | ||
Sbjct 15260 AGCCCTGACGGACTCGCTTGGCTCGACCTTGTACAGATTGACCTGGAAGCAGAGAACTAC 15201
Query 27981 GCCTTCGCAGGTTTCGATCTCTGCGCTGCGGGCTTCGGTGCCCCGCACATCCGCCAGCGC 28040
||| |||| | ||| | |||||||||||||||||||| ||||||| ||| || ||
Sbjct 15200 GCCACAGCAGCGCTTGATTTATGCGCTGCGGGCTTCGGTGCGCCGCACAGCCGACAACGA 15141
Query 28041 CTCTTCTGGGTGGCCGACGCCGAC 28064
|| | |||||||||||||||| ||
Sbjct 15140 CTTTACTGGGTGGCCGACGCCCAC 15117
Score = 125 bits (138), Expect = 2e-24
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 28363 ACGGCTTCTGGGGATCTGCTGACTGGCTTTTCTGCCGGGATGGAAAGTGGAGGCCAGTTA 28422
||||||||||| || ||||||||||| | ||||||||||||||| ||| ||||||||
Sbjct 14887 ACGGCTTCTGGCGAGAGGCTGACTGGCTCTGCTGCCGGGATGGAAAATGGCGGCCAGTTG 14828
Query 28423 AACCCGGAATTAGCCCTTTGGTTGATGGGGTTGCCGGACGAGTGGGCCAGCTGCGCGCCT 28482
||||||| | |||| ||| ||||||| || || ||||||| | ||||||||||
Sbjct 14827 AACCCGGCACACGCCCGCTGGCTGATGGGATTACCAACAGAGTGGGACGACTGCGCGCCT 14768
Query 28483 ACGGTAATGCCATCGTTGCGCC 28504
|||||||| || || ||||||
Sbjct 14767 ACGGTAATACCCTCAATGCGCC 14746
>seq2
Length=8990745
Score = 132 bits (146), Expect = 1e-26
Identities = 189/260 (73%), Gaps = 6/260 (2%)
Strand=Plus/Plus
Query 252 GCGTAAGGGTTGAAGCGCACCACGTCGATCCCCAGCCAGTCGTTTAACTCTTTCAG-GCT 310
||||| ||||||||||| | ||| || || | ||||||||| || | | ||||| |||
Sbjct 6245056 GCGTAGGGGTTGAAGCGGATCACTTCCATACTCAGCCAGTCATTGACATGCTTCAGCGCT 6245115
Query 311 TTCTTGTATCGGGGCCAGTTCGTTGATGGAAAACACCTTCGCCGCTTTCTCTACGTCGCC 370
| | || | ||| ||||||||| |||| ||||||| ||||||||||| ||||| ||
Sbjct 6245116 TCCATG-ACCGGCATCAGTTCGTTAATGGCAAACACCCGTGCCGCTTTCTCAACGTCACC 6245174
Query 371 GAAGCCACCGGAGTTATTCGGCATTACCCCCATCAGAACGGGCGGCACACGGTGCGCGGC 430
||| ||| | | |||||| |||||||||| |||| |||||||||||||||
Sbjct 6245175 GAATGAGCCGTTGCCCTCCGGCATGGCCCCCATCAGTTGCGGCGACACACGGTGCGCGGC 6245234
Query 431 TAACAGGTCGTCGCGGGTGGC-GTCTT-TGATGCCGGTAAACTCATCCTTCGCCGCCACC 488
| | ||||| ||||| | | ||| || | || || |||||||| |||| | |
Sbjct 6245235 AAGGATATCGTCACGGGTAACAGACTTGATATTCAGG--AATTCATCCTTGGCCGATATC 6245292
Query 489 TGGCTGAACGGCATAATTTG 508
|| ||||| || || |||||
Sbjct 6245293 TGACTGAAAGGGATGATTTG 6245312
>seq10505
Length=1270
Score = 127 bits (140), Expect = 4e-25
Identities = 135/176 (77%), Gaps = 4/176 (2%)
Strand=Plus/Plus
Query 28351 CCAATGCGGTTAACGGCTTCTGGGGATCTGCTGACTGGCTTTTCTGCCGGGATGGAAAGT 28410
||| ||||||||||||||||||| || ||||||||||| | |||||||||| |||||
Sbjct 355 CCAGTGCGGTTAACGGCTTCTGGCGAGAGGCTGACTGGCTCCTGTGCCGGGATGAAAAGT 414
Query 28411 GGAGGCCAGTTAAACCCG--GAATTAGCCCTTTGGTTGATGGGGTTGCCGGACGAGTGGG 28468
|| |||||||| |||||| | ||| ||| ||| | |||||||| || || |||||
Sbjct 415 GGCGGCCAGTTGAACCCGGCGCATT--CCCGCTGGCTTATGGGGTTACCAACCGCGTGGG 472
Query 28469 CCAGCTGCGCGCCTACGGTAATGCCATCGTTGCGCCGGTCGCGGAAGCGTTCATAG 28524
| |||||||||||||| || || ||| | | || || ||||||||||||
Sbjct 473 ACGACTGCGCGCCTACGGAAACGCTATCAACGTGGAGGCGGCAAAAGCGTTCATAG 528
Score = 100 bits (110), Expect = 6e-17
Identities = 126/169 (75%), Gaps = 8/169 (5%)
Strand=Plus/Plus
Query 27900 GTCTTTGGGGAACAGGTTGCAAGCAAAGACGG---CCTCGCATGGCTCGACGCTGTACAG 27956
|| ||||| |||||||||||||||| | | |||| ||| ||||| |||||||
Sbjct 108 GTTTTTGGTGAACAGGTTGCAAGCAGCCATGCAAACCTC---TGGTTCGACCTTGTACAG 164
Query 27957 GCTGATCTGGAAAACGCGGATTATGCCTTCGCAGGTTTCGATCTCTGCG-CTGCGGGCTT 28015
||||| |||||| || ||| || ||||||| || | | | | || |||||||| |
Sbjct 165 GCTGACCTGGAAGCCGTGGACTACGCCTTCGGGTGTGT-GCCGTTTCCGTCTGCGGGCGT 223
Query 28016 CGGTGCCCCGCACATCCGCCAGCGCCTCTTCTGGGTGGCCGACGCCGAC 28064
|||||||||||| |||||| | || | |||||||||| ||||||||
Sbjct 224 CGGTGCCCCGCATATCCGCGACCGGGCGTACTGGGTGGCCTACGCCGAC 272
>seq2192
Length=16777
Score = 127 bits (140), Expect = 4e-25
Identities = 135/176 (77%), Gaps = 4/176 (2%)
Strand=Plus/Minus
Query 28351 CCAATGCGGTTAACGGCTTCTGGGGATCTGCTGACTGGCTTTTCTGCCGGGATGGAAAGT 28410
||| ||||||||||||||||||| || ||||||||||| | |||||||||| |||||
Sbjct 16424 CCAGTGCGGTTAACGGCTTCTGGCGAGAGGCTGACTGGCTCCTGTGCCGGGATGAAAAGT 16365
Query 28411 GGAGGCCAGTTAAACCCGGA--ATTAGCCCTTTGGTTGATGGGGTTGCCGGACGAGTGGG 28468
|| |||||||| ||||||| ||| ||| ||| | |||||||| || || |||||
Sbjct 16364 GGCGGCCAGTTGAACCCGGCGCATT--CCCGCTGGCTTATGGGGTTACCAACCGCGTGGG 16307
Query 28469 CCAGCTGCGCGCCTACGGTAATGCCATCGTTGCGCCGGTCGCGGAAGCGTTCATAG 28524
| |||||||||||||| || || ||| | | || || ||||||||||||
Sbjct 16306 ACGACTGCGCGCCTACGGAAACGCTATCAACGTGGAGGCGGCAAAAGCGTTCATAG 16251
Score = 100 bits (110), Expect = 6e-17
Identities = 126/169 (75%), Gaps = 8/169 (5%)
Strand=Plus/Minus
Query 27900 GTCTTTGGGGAACAGGTTGCAAGCAAAGACGG---CCTCGCATGGCTCGACGCTGTACAG 27956
|| ||||| |||||||||||||||| | | |||| ||| ||||| |||||||
Sbjct 16671 GTTTTTGGTGAACAGGTTGCAAGCAGCCATGCAAACCTC---TGGTTCGACCTTGTACAG 16615
Query 27957 GCTGATCTGGAAAACGCGGATTATGCCTTCGCAGGTTTCGATCTCTGCG-CTGCGGGCTT 28015
||||| |||||| || ||| || ||||||| || | | | | || |||||||| |
Sbjct 16614 GCTGACCTGGAAGCCGTGGACTACGCCTTCGGGTGTGT-GCCGTTTCCGTCTGCGGGCGT 16556
Query 28016 CGGTGCCCCGCACATCCGCCAGCGCCTCTTCTGGGTGGCCGACGCCGAC 28064
|||||||||||| |||||| | || | |||||||||| ||||||||
Sbjct 16555 CGGTGCCCCGCATATCCGCGACCGGGCGTACTGGGTGGCCTACGCCGAC 16507
>seq81
Length=1823934
Score = 120 bits (132), Expect = 7e-23
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 252 GCGTAAGGGTTGAAGCGCACCACGTCGATCCCCAGCCAGTCGTTTAACTCTTTCAG-GCT 310
||||| ||||||||||| | ||| || || | ||||||||| || | | ||||| |||
Sbjct 1007126 GCGTAGGGGTTGAAGCGGATCACTTCCATACTCAGCCAGTCATTGACATGCTTCAGCGCT 1007185
Query 311 TTCTTGTATCGGGGCCAGTTCGTTGATGGAAAACACCTTCGCCGCTTTCTCTACGTCGCC 370
| | || | ||| ||||||||| |||| ||||||| ||||||||||| ||||| ||
Sbjct 1007186 TCCATG-ACCGGCATCAGTTCGTTAATGGCAAACACCCGTGCCGCTTTCTCAACGTCACC 1007244
Query 371 GAAGCCACCGGAGTTATTCGGCATTACCCCCATCAGAACGGGCGGCACACGGTGCGCGGC 430
||| ||| | | |||||| |||||||||| |||| |||||||||||||||
Sbjct 1007245 GAATGAGCCGTTGCCCTCCGGCATGGCCCCCATCAGTTGCGGCGACACACGGTGCGCGGC 1007304
Query 431 TAACAGGTCGTCGCGGGT 448
| | ||||| |||||
Sbjct 1007305 AAGGATATCGTCACGGGT 1007322
>seq8600
Length=1434
Score = 84.2 bits (92), Expect = 5e-12
Identities = 209/315 (66%), Gaps = 2/315 (1%)
Strand=Plus/Plus
Query 21121 TATACGGTTGACGAGATCGGACACGCTGGCCCGCCTGACCAGCTAACGATCAGTGCCAGA 21180
||||| ||||| || ||| || | | |||||| || ||| | |||| || |
Sbjct 1102 TATACCGTTGATGAAGTCGCCCATGAAGACCCGCCGGATGTGCTCAACATCACGGCACGT 1161
Query 21181 AGCGCAGATTTCCGCGATACCTTCAACGTGAAAAGGGAATATAGCTGGCACGATATTACC 21240
||||||||||| || ||| || || || || | || |||||||||| | ||
Sbjct 1162 AGCGCAGATTTTCGTGATGAATTTAATGTCAAGCGTGAGGTGTCCTGGCACGATGTGACT 1221
Query 21241 GTGGGGGATGTGGTCGCCAGC-ATTGCCAGCCGCTACGATCTGCGTGCGGGTGTCAGCGA 21299
|| | | |||||| | | || || || ||| | || ||| ||| |||||||
Sbjct 1222 GTTGAGCGTGTGGT-GTCTGCTATCGCGCACCGTTGCGGGCTGAAAGCGCAAATCAGCGA 1280
Query 21300 AGAACTGGCGAAGATTGAGATAGACCACGCCGATCAGACGAGTGAATCAGATATCAGCTT 21359
||| ||| ||||| || ||||||||||| ||||| ||| |||| ||
Sbjct 1281 CATGCTGATGAACATTGACATTGACCACGCCGACCAGACACAAGAAAGCAATATGTCGTT 1340
Query 21360 CTTAACGCGCATGGCCGAAATGCTGGGCGCGGTGGCAACCATTAAAAACGGTATGCTTCT 21419
||||| || ||| | ||||||||||||||| | || || |||||||||| | ||
Sbjct 1341 TTTAACCCGAATGCCAGAAATGCTGGGCGCGATTGCCACGGTTAAAAACGGAGCATTGCT 1400
Query 21420 GTTTATCACGCCGGG 21434
||||||| ||| ||
Sbjct 1401 GTTTATCCTGCCCGG 1415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107086166622774
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