Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq57 141 2e-28 >seq57 Length=2082711 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| |||||||| || | || |||||||| || ||||||||||| | ||| || Sbjct 1618847 CGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCAGAAAGAGTT 1618906 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||||| ||| || || ||||| || | | ||| || || ||||| | |||| Sbjct 1618907 CGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGAGGGATTCCT 1618966 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| || || ||||| ||| || ||||| || || ||||| ||| || || | Sbjct 1618967 TCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCTACTTCTAAG 1619026 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || | ||| || || || | |||||| Sbjct 1619027 GTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067 Score = 136 bits (150), Expect = 9e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 ||| ||||| ||||| || | ||| || ||||| ||||| || || || | || || | Sbjct 1619761 AAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTGCG 1619820 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||||||| |||||||||||| ||||| | | ||||| || || |||| ||||| Sbjct 1619821 ACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCTTC 1619880 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 || || || || || |||||| ||||| || |||||||| ||| || || | || Sbjct 1619881 TTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGT 1619940 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || |||||||| || | ||||| ||||| | ||||||| Sbjct 1619941 AATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCATT 1619980 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| || || || || | ||| || || || || || |||||||| | | ||| Sbjct 1618618 ACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGACAAGGT 1618677 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| || || |||||||| || | | ||| |||||||| || | ||| Sbjct 1618678 GCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCC 1618737 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| || || || |||||| ||||| || |||||||| |||||| || || Sbjct 1618738 TTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCAACTTCAAG 1618797 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || ||||| || | ||| || ||||| | ||||| Sbjct 1618798 AGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||||||||| || || || ||||| | || || | |||||||||| |||||||||| Sbjct 1620239 GTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCATCTTCCAACTGCTTGCCT 1620298 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | | ||||| || || |||| ||||| || || || || || |||| Sbjct 1620299 GCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTTC 1620358 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || ||||| ||| || || | ||||| || ||||| || | || Sbjct 1620359 ACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGGTTTTTCCGGTTAACGTT 1620418 Query 211098 TTTACAAACACCTGCAT 211114 || || || | |||||| Sbjct 1620419 TTGACGAATATCTGCAT 1620435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158906398512005