Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq33 168 6e-37
>seq33
Length=2490231
Score = 168 bits (186), Expect = 6e-37
Identities = 155/196 (79%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 4816 GAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCT 4875
|||||||||| ||||| |||| || ||||| ||||| || | |||||| || ||||| |
Sbjct 181689 GAATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATTGCAATTT 181630
Query 4876 GAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTA 4935
| || |||||||| ||||| ||||| |||||||||||||| | || ||| || || ||||
Sbjct 181629 GGAAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTCTCAACTA 181570
Query 4936 AGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT 4995
||||||| || || || || ||| ||| ||||| || ||||| |||||||| ||||| |
Sbjct 181569 AGTTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAAATAAAAT 181510
Query 4996 ACTGTTCGTCAGGCTT 5011
| ||| ||||| ||
Sbjct 181509 GTTTTTCTTCAGGTTT 181494
Score = 102 bits (112), Expect = 7e-17
Identities = 79/94 (84%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 5045 ATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATC 5104
||||||||||||||| |||||||| |||||||| |||||||||||||| ||| |||||
Sbjct 181285 ATCAACTTCTTCAACCGTCCAAAAAGACGCTTCTGCTTTTTTGTACATTTGCCATATATC 181226
Query 5105 AGGATACTGAATCGGAAGTATGACAAATCTGTTG 5138
| | || | ||| |||| ||| |||||||| |||
Sbjct 181225 ATGGTATTCAATTGGAAATATCACAAATCTTTTG 181192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426963530421821
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |