Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq33 168 6e-37 >seq33 Length=2490231 Score = 168 bits (186), Expect = 6e-37 Identities = 155/196 (79%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 4816 GAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCT 4875 |||||||||| ||||| |||| || ||||| ||||| || | |||||| || ||||| | Sbjct 181689 GAATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATTGCAATTT 181630 Query 4876 GAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTA 4935 | || |||||||| ||||| ||||| |||||||||||||| | || ||| || || |||| Sbjct 181629 GGAAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTCTCAACTA 181570 Query 4936 AGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT 4995 ||||||| || || || || ||| ||| ||||| || ||||| |||||||| ||||| | Sbjct 181569 AGTTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAAATAAAAT 181510 Query 4996 ACTGTTCGTCAGGCTT 5011 | ||| ||||| || Sbjct 181509 GTTTTTCTTCAGGTTT 181494 Score = 102 bits (112), Expect = 7e-17 Identities = 79/94 (84%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 5045 ATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATC 5104 ||||||||||||||| |||||||| |||||||| |||||||||||||| ||| ||||| Sbjct 181285 ATCAACTTCTTCAACCGTCCAAAAAGACGCTTCTGCTTTTTTGTACATTTGCCATATATC 181226 Query 5105 AGGATACTGAATCGGAAGTATGACAAATCTGTTG 5138 | | || | ||| |||| ||| |||||||| ||| Sbjct 181225 ATGGTATTCAATTGGAAATATCACAAATCTTTTG 181192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426963530421821