Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq3504 196 7e-45 >seq3504 Length=7869 Score = 196 bits (216), Expect = 7e-45 Identities = 197/256 (77%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 99193 GCCGAAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTT 99252 ||||||| |||| | || || ||||| ||| | || |||||||| |||||||||||||| Sbjct 7493 GCCGAAGGGAGACAGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTT 7552 Query 99253 CAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTAT 99312 |||||||||||| || ||||||||||| || || |||||||| || |||| || || || Sbjct 7553 CAATCTGCAAGACGGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCAT 7612 Query 99313 TCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGG 99372 |||||| ||| |||||||||| || || || ||||| || ||| | | || ||| Sbjct 7613 TCACGAGCTGTTGTGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAA 7672 Query 99373 TGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAA 99432 || | |||||||| |||||| | | ||||||| || || |||||||||||||| Sbjct 7673 AGTTAGCATTTGGGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAA 7732 Query 99433 ACAGTGGCGGTCTTGG 99448 |||||||| ||||| Sbjct 7733 GCAGTGGCGCGCTTGG 7748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716315897935400