Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq33 134 2e-26
seq126 109 8e-19
>seq33
Length=2490231
Score = 134 bits (148), Expect = 2e-26
Identities = 143/189 (76%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 46896 AACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTG 46955
|| ||| |||||||| | | ||| ||||| || || |||| ||||| || || || ||
Sbjct 181688 AATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATTGCAATTTG 181629
Query 46956 AAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAA 47015
|| ||||||||||||||||||||||| | || || ||| || ||| | ||| ||
Sbjct 181628 GAAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTCTCAACTAA 181569
Query 47016 ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATA 47075
|| ||||| || ||||||||| |||||||| || ||||||||||| ||||||||
Sbjct 181568 GTTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAAATAAAATG 181509
Query 47076 TTTTTCATC 47084
|||||| ||
Sbjct 181508 TTTTTCTTC 181500
Score = 127 bits (140), Expect = 3e-24
Identities = 167/225 (74%), Gaps = 5/225 (2%)
Strand=Plus/Minus
Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711
||||||||||| ||| ||||| || || || ||||| ||||||| ||| | || |
Sbjct 182650 CTTCATCTCTAGAAATCAATTCATTGCTGAAAGTAAGCCCTGGCATTAATCCTCTTTTCT 182591
Query 46712 TGAGCCAAAATATAGCCGCGAAAGAT-CCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770
| | ||||||||||||||| |||| | ||||| || |||| |||||| ||||| || ||
Sbjct 182590 TTAACCAAAATATAGCCGC-AAAGCTACCAGAGAAAAATACGCCTTCCACAGCAGCAAAA 182532
Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCA-TCAT-TATGA-ATCCACCTTTGAGCCCAATCA 46827
|| | || ||| ||| | || ||||| || | | || ||||| |||||| |||
Sbjct 182531 GCAATAATTCTTTCTGCAAAAGTGGCAGTCTTAGAGGAGATCCATTCCAAAGCCCAGTCA 182472
Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 46872
|| |||||||| |||||| || || || || ||||||||||||
Sbjct 182471 GCTTTTTTCTTCACACAATCCAGAGTCTCAATTGCATTAAAGAGA 182427
Score = 109 bits (120), Expect = 8e-19
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175
||||| | ||| ||||||||| | ||||| || ||||| ||||||||||| ||||| | |
Sbjct 181293 TTTGAAAGATCAACTTCTTCAACCGTCCAAAAAGACGCTTCTGCTTTTTTGTACATTTGC 181234
Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATA 47235
||||||||| | |||| || ||||| || |||||||| || || |||| ||||| |
Sbjct 181233 CATATATCATGGTATTCAATTGGAAATATCACAAATCTTTTGGGGTTTTCACGAAGTAGA 181174
Query 47236 GGTTC 47240
|||||
Sbjct 181173 GGTTC 181169
Score = 84.2 bits (92), Expect = 3e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| ||||| ||||| || ||||||||| |||||| | || ||||||||||| || | |
Sbjct 182932 AGCCTATCAGCAACAAACTCTATATACTGTTTCATTAGCTCGCAATTCATTCCAATCATT 182873
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578
| || || | || || || ||||| || | |||||| || ||||| |||||
Sbjct 182872 TCTACTGGCAAGGCTTCTGTGAGAAATTCCTTCTCAATAACCACTGCATCTTCAATTATT 182813
Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638
|| || | | | || | | ||| || | | |||||| ||||| | || ||||||
Sbjct 182812 GAGGTGATTCTCTCTTTGGTCGGTTTTTGAACAAGATGTTTGAACATAAGGCAGGCAAAA 182753
Query 46639 TCACAATGAAGGCC 46652
|||||||| || ||
Sbjct 182752 TCACAATGTAGACC 182739
>seq126
Length=1333976
Score = 109 bits (120), Expect = 8e-19
Identities = 141/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057
||||||| |||| ||||| |||||||| ||||| | ||| || | |||||||| |
Sbjct 1318393 CTGCATTGAACATCGTAGGTGATGCATGCGTGAAGTAACCTTCCGACATCAGATTGTAAG 1318334
Query 77058 TTTCAATAACTGCTTCTATATCCCATTGA--TGAATTCCTACAGCGACACGCATCAACAT 77115
| || || |||| || ||||| || | ||||| || ||||| || | |||||||||
Sbjct 1318333 TCTCTATGGCTGCGTCAATATC--ATCGCCGTGAATACCCACAGCAACCCTCATCAACAT 1318276
Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175
||||||||| ||||| || |||| || ||||| || || ||||| |||||| ||
Sbjct 1318275 ATGCTGAGGGCGTTCCACTACTTTATCATGGATTTTTAATAAATATGAACGTTCCAATGT 1318216
Query 77176 TTTAAAACCAAAA 77188
| |||| ||||
Sbjct 1318215 CTAAAAAAAAAAA 1318203
Score = 105 bits (116), Expect = 1e-17
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503
|||| |||||||||||||| |||| ||| |||| | || || || ||||| | ||
Sbjct 1329714 TCCACCCGTAGAAATGCATAGAAGTTAATTTTCCATAATTTGGTTCAGCAATATGTACAT 1329773
Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563
| | || || ||||||||| || ||||||||||| || |||||||||| || || |
Sbjct 1329774 TTAAGGATTGTGATTGATCGATAAATGCTCCTCTATCTGCTGCCATTTTTAATATAGTTT 1329833
Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614
| || | ||||||||| | |||||| ||| ||| | |||||| ||||
Sbjct 1329834 TCTGTGAAATTTCCCACACTGTTTTGTAAATAGCTTTTAAATCATCCGGAA 1329884
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780
||||||||||||||| || || |||| ||||| ||||| | ||| | ||||| | ||
Sbjct 1331858 TTGAAATTCTCCAGATAAGACCCTTCTTGTGTACATATTTGTAGTAAACGGTTCAAATGA 1331917
Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840
||||||||| || | || || || || ||||| || ||||| ||||| | | ||
Sbjct 1331918 TTCATTGTTGCCAAGTATCTGCGCTGTAGAAGCTGTAGGCATTGGTGCTAGTAGCAAGGA 1331977
Query 75841 ATTTCTGAGACCATGT 75856
|||||| |||||||||
Sbjct 1331978 ATTTCTCAGACCATGT 1331993
Score = 84.2 bits (92), Expect = 3e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 76523 AATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCAC 76582
|| || || ||||||||||| | || || || | ||| ||||||||||| |||||
Sbjct 1321520 AACTCCTCGCCCCAAACATCTGCTAAGCCTGGCGACACATGTGGACACATCAACGACCAT 1321461
Query 76583 TCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 76642
|||||| | || ||| |||| |||||| |||||||| ||||||| ||| || |||
Sbjct 1321460 ACACCATTTGACTCAACTCGTTCCATAAAAAGATCAGGAATCCATAATGCATAGAAAAGA 1321401
Query 76643 TCTC 76646
||||
Sbjct 1321400 TCTC 1321397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712787027547840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |