Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq3504 125 1e-23 >seq3504 Length=7869 Score = 125 bits (138), Expect = 1e-23 Identities = 212/305 (70%), Gaps = 4/305 (1%) Strand=Plus/Plus Query 99468 ATGAAACAATATTTGGAATTAATGAGTAAGGTTTTAAATGAAGG--CGTTGTTAAAGGCG 99525 |||||||| ||| ||||||| ||| || || | |||| || || | || || | Sbjct 7446 ATGAAACAGTATCTGGAATTGATGCAGAAAGTGCTTGATGAGGGAACGCCG--AAGGGAG 7503 Query 99526 ACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTGGCTG 99585 || | || ||||| || || || || | || || || || |||||||| ||| || | Sbjct 7504 ACAGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAG 7563 Query 99586 AAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTCATGAACTCC 99645 | |||||||| ||||| || || |||||||| || || || || || ||||| || || Sbjct 7564 ACGGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTGT 7623 Query 99646 TTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTCACTATCT 99705 | |||||||| || || || ||||| || ||| | || || || | || | Sbjct 7624 TGTGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATTT 7683 Query 99706 GGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTGGCGGT 99765 || |||| |||| | ||||| || || | || ||||||||||| ||||||||||| Sbjct 7684 GGGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCGCG 7743 Query 99766 CTTGG 99770 ||||| Sbjct 7744 CTTGG 7748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734123416137720