Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_031059.1
Length=38773
Score E
Sequences producing significant alignments: (Bits) Value
seq1601 289 7e-74
>seq1601
Length=30922
Score = 289 bits (320), Expect = 7e-74
Identities = 480/681 (70%), Gaps = 24/681 (4%)
Strand=Plus/Minus
Query 15334 GCTCCCGCATCACCGCGCTGCCGGCCAACCCCGACACGGCGCGGGGGTTCAGTGCCAATG 15393
|||| || || ||||| || ||||| ||||| || |||||||| || || |||||||
Sbjct 4844 GCTCGCGTATTACCGCACTCCCGGCGAACCCGGATACGGCGCGCGGCTTTGCCGCCAATG 4785
Query 15394 TGATCCTCGACGAATTCGCCTTTCACGCCAAGTCGCGCGAGATCTGGGCGGCGCTCTTCC 15453
|| | ||||| || || |||||||| ||| | ||| | |||||| ||||||| || |
Sbjct 4784 TGTTTCTCGATGAGTTTGCCTTTCATGCCGACAGCCGCAAAATCTGGACGGCGCTGTTTC 4725
Query 15454 CGGTCGTGTCCAAGGGCGATCAGAAGCTGCGGGTGATCAGCACGCCCAACGGCAAGGGCA 15513
|||| | || || ||| | ||| |||||| || | ||| || |||||||| ||||
Sbjct 4724 CGGTGATATCGAACGGCTA-CAG--GCTGCGCGTCACTTCCACCCCGAACGGCAAAGGCA 4668
Query 15514 ACAAGTTCTTCGAGCTGATGACGG------CCGAGGACAGTGTCTGGTCGCGCCATGTGG 15567
|||| |||| ||||||||||| | || ||| | |||||||||||||||||||
Sbjct 4667 ACAAATTCTATGAGCTGATGACCGATGCGTCCCTGGATACCGTCTGGTCGCGCCATGTGG 4608
Query 15568 TCGATATCTACGAGGCCGTGCGCCA-GGGCTGCCCGCGCGATGTGG---ACATGC-TGCG 15622
| ||||||||| |||| || || | |||||||| ||||||| | | |||||| |||
Sbjct 4607 TGGATATCTACCAGGCGGTACGTGAAGGGCTGCC-GCGCGATATTGCCGACATGCGTGC- 4550
Query 15623 CGCCGGGATCGCGGACGAGGATGCCTGGGCGCAGGAATACGAGCT-GAAATGGCTGGATG 15681
|||| || || |||||||||| ||||||||||| | || || |||||||||||||
Sbjct 4549 CGCCCTGAACG---ACGAGGATGCGTGGGCGCAGGAGTTTGAACTCAAAATGGCTGGATG 4493
Query 15682 CCGCCAGCGCCTGGCTCGATTACGACCTGATCTCCGCCTGCGAACGCGAGGAGGCCGGCA 15741
|| ||||||| || | ||||| | | || | || ||| || |
Sbjct 4492 AAGCATCAAGCTGGCTCTCCTATGCGCTGATTGATGGCGTAGAGCATGACCTGGCGGGTA 4433
Query 15742 AGCCAGAGCTTTACCAGGGCGGCCCCTGCTTCGTGGGGGTCGACATTGCGGCGCGCAACG 15801
|| || | || | ||||||||||| || ||||| || || || | || | |
Sbjct 4432 TCCCCGAACACTATGCCGAGGGCCCCTGCTTTGTCGGGGTTGATATCGCCACCCGTCATG 4373
Query 15802 ACCTGTTCGTGATCTGGGTGGTGGAAGAGACGGGCG--GCCGGCTGGTCACGCGCGAGGT 15859
||||||| ||||| |||||| | || || ||||| | |||| |||||||| |
Sbjct 4372 ACCTGTTTGTGATTTGGGTGATTGAGCAGGTGGGCGATGTGTACTGG--ACGCGCGACAT 4315
Query 15860 GATTGCGCAAAAGCGGATCACATTCGCCGAACAGGACGCGCTGCTGGACGATGTCTTCCG 15919
||| | | || || ||| || ||||| |||||||| ||||| || | |||||
Sbjct 4314 CATTACCCGCAAACGAGCCACCTTTGCCGAGCAGGACGCACTGCTCGATGCGGTCTTTTT 4255
Query 15920 CCGTTATCGCGTGGTGCGCGCGGGTATGGACCAGACCGGCATGGGCGAAAAACCGGTGGA 15979
|| || || || |||| | || ||||||||||||||||| ||||| ||||||||
Sbjct 4254 TCGCTACCGGGTACTGCGTTGCTGCATTGACCAGACCGGCATGGGTGAAAAGCCGGTGGA 4195
Query 15980 GGACGCCAAGCGCCGCCATGG 16000
|| ||||| ||||| |||||
Sbjct 4194 AGATGCCAAACGCCGTCATGG 4174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123927658693590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |