Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_031059.1 Length=38773 Score E Sequences producing significant alignments: (Bits) Value seq1601 289 7e-74 >seq1601 Length=30922 Score = 289 bits (320), Expect = 7e-74 Identities = 480/681 (70%), Gaps = 24/681 (4%) Strand=Plus/Minus Query 15334 GCTCCCGCATCACCGCGCTGCCGGCCAACCCCGACACGGCGCGGGGGTTCAGTGCCAATG 15393 |||| || || ||||| || ||||| ||||| || |||||||| || || ||||||| Sbjct 4844 GCTCGCGTATTACCGCACTCCCGGCGAACCCGGATACGGCGCGCGGCTTTGCCGCCAATG 4785 Query 15394 TGATCCTCGACGAATTCGCCTTTCACGCCAAGTCGCGCGAGATCTGGGCGGCGCTCTTCC 15453 || | ||||| || || |||||||| ||| | ||| | |||||| ||||||| || | Sbjct 4784 TGTTTCTCGATGAGTTTGCCTTTCATGCCGACAGCCGCAAAATCTGGACGGCGCTGTTTC 4725 Query 15454 CGGTCGTGTCCAAGGGCGATCAGAAGCTGCGGGTGATCAGCACGCCCAACGGCAAGGGCA 15513 |||| | || || ||| | ||| |||||| || | ||| || |||||||| |||| Sbjct 4724 CGGTGATATCGAACGGCTA-CAG--GCTGCGCGTCACTTCCACCCCGAACGGCAAAGGCA 4668 Query 15514 ACAAGTTCTTCGAGCTGATGACGG------CCGAGGACAGTGTCTGGTCGCGCCATGTGG 15567 |||| |||| ||||||||||| | || ||| | ||||||||||||||||||| Sbjct 4667 ACAAATTCTATGAGCTGATGACCGATGCGTCCCTGGATACCGTCTGGTCGCGCCATGTGG 4608 Query 15568 TCGATATCTACGAGGCCGTGCGCCA-GGGCTGCCCGCGCGATGTGG---ACATGC-TGCG 15622 | ||||||||| |||| || || | |||||||| ||||||| | | |||||| ||| Sbjct 4607 TGGATATCTACCAGGCGGTACGTGAAGGGCTGCC-GCGCGATATTGCCGACATGCGTGC- 4550 Query 15623 CGCCGGGATCGCGGACGAGGATGCCTGGGCGCAGGAATACGAGCT-GAAATGGCTGGATG 15681 |||| || || |||||||||| ||||||||||| | || || ||||||||||||| Sbjct 4549 CGCCCTGAACG---ACGAGGATGCGTGGGCGCAGGAGTTTGAACTCAAAATGGCTGGATG 4493 Query 15682 CCGCCAGCGCCTGGCTCGATTACGACCTGATCTCCGCCTGCGAACGCGAGGAGGCCGGCA 15741 || ||||||| || | ||||| | | || | || ||| || | Sbjct 4492 AAGCATCAAGCTGGCTCTCCTATGCGCTGATTGATGGCGTAGAGCATGACCTGGCGGGTA 4433 Query 15742 AGCCAGAGCTTTACCAGGGCGGCCCCTGCTTCGTGGGGGTCGACATTGCGGCGCGCAACG 15801 || || | || | ||||||||||| || ||||| || || || | || | | Sbjct 4432 TCCCCGAACACTATGCCGAGGGCCCCTGCTTTGTCGGGGTTGATATCGCCACCCGTCATG 4373 Query 15802 ACCTGTTCGTGATCTGGGTGGTGGAAGAGACGGGCG--GCCGGCTGGTCACGCGCGAGGT 15859 ||||||| ||||| |||||| | || || ||||| | |||| |||||||| | Sbjct 4372 ACCTGTTTGTGATTTGGGTGATTGAGCAGGTGGGCGATGTGTACTGG--ACGCGCGACAT 4315 Query 15860 GATTGCGCAAAAGCGGATCACATTCGCCGAACAGGACGCGCTGCTGGACGATGTCTTCCG 15919 ||| | | || || ||| || ||||| |||||||| ||||| || | ||||| Sbjct 4314 CATTACCCGCAAACGAGCCACCTTTGCCGAGCAGGACGCACTGCTCGATGCGGTCTTTTT 4255 Query 15920 CCGTTATCGCGTGGTGCGCGCGGGTATGGACCAGACCGGCATGGGCGAAAAACCGGTGGA 15979 || || || || |||| | || ||||||||||||||||| ||||| |||||||| Sbjct 4254 TCGCTACCGGGTACTGCGTTGCTGCATTGACCAGACCGGCATGGGTGAAAAGCCGGTGGA 4195 Query 15980 GGACGCCAAGCGCCGCCATGG 16000 || ||||| ||||| ||||| Sbjct 4194 AGATGCCAAACGCCGTCATGG 4174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123927658693590