Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_031077.1
Length=41760
Score E
Sequences producing significant alignments: (Bits) Value
seq6037 104 6e-18
seq2617 82.4 2e-11
>seq6037
Length=3259
Score = 104 bits (114), Expect = 6e-18
Identities = 172/251 (69%), Gaps = 12/251 (5%)
Strand=Plus/Minus
Query 41420 ATGGCTAAATCCCCAGCAGAACGCAAAGCCGCGCAGCGCGCGCGGCAGTCCGCCGCCGGT 41479
||| ||||||||||||||||||| |||||||| ||||| | | || ||
Sbjct 2425 ATGCCTAAATCCCCAGCAGAACGTAAAGCCGCCCAGCGGGAG------------GCTGGC 2378
Query 41480 GAGCGCAAGCTTGAACTGGTGCTGGATGCTCAGGAACTGGACATGCTGGCGCGGAACTGC 41539
| ||| ||||||| || ||| |||||||||||||||||||| |||||||||
Sbjct 2377 GTAACAAAGTTTGAACTTAACCTCGATACTCAGGAACTGGACATGCTGCGCCGGAACTGC 2318
Query 41540 GCCGCCCGGCGCCCTGGGCGTGCGCCGTATGAAATGTCTGAGTACATCGCGATGCTGATT 41599
|| | ||||| || || | ||| || || ||| ||||| ||| | |||||||
Sbjct 2317 GCTGTACGGCGACCAGGCAAAGAGCCCTACGACATGGACGAGTATATCCAGTTGCTGATC 2258
Query 41600 CGCCAGGATGATGCACGCGTTCGTGGGCGTATCAAATCTATCAGCGCTAACCGCTGCGGG 41659
||| |||| || || | || || ||| || ||||| ||||| | || |||||
Sbjct 2257 CGCTAGGACGACGCCAGAGTGCGACAGCGGATTAAATCGCTCAGCAAGCAACGTTGCGGT 2198
Query 41660 AAGTGCGGTGA 41670
|| || || ||
Sbjct 2197 AAATGTGGCGA 2187
>seq2617
Length=13952
Score = 82.4 bits (90), Expect = 2e-11
Identities = 175/251 (70%), Gaps = 19/251 (8%)
Strand=Plus/Minus
Query 21114 GTTGTCATAGTGATCA---CCTTTGTAGTTCCGGTTAATCACCACCGCTGAGAC-CAA-- 21167
||||||||||| || | |||| ||||| || ||||||||| | | |||
Sbjct 1445 GTTGTCATAGTAATGATTTCCTTGTTAGTTAAGGAACATCACCACCTAGAGGTCTCAAAC 1386
Query 21168 TCAGAT-GGTGGTGAACTGTGCAGAGTTGGTCTTACCGGCTACAAAGGACCCGGCGCACC 21226
||| || || ||||||||| || |||| ||||||||| |||||||||||| ||
Sbjct 1385 TCATATTGGCGGTGAACTGAATAGGGTTGAGACTACCGGCTAACAAGGACCCGGCGAGCC 1326
Query 21227 GTGAGGTGCCCCCACACAGCCCACCATAGAATATGGGTGCTAT----GCTTCACGCATaa 21282
|| || |||||| ||||||||||| ||| || ||| | | ||||||||
Sbjct 1325 TTGCGGCTCCCCCATCCAGCCCACCAT----TAT-TCTGATATGGCGGACTGACGCATAA 1271
Query 21283 aaaaaC-CGCT-CGCGCG-GTAATGCGCCTCTGTAGTAATCCGGGAGACCAATCCCGGCA 21339
|||||| |||| ||| || |||||||| |||| ||||||| ||| |||||||
Sbjct 1270 AAAAACACGCTGTAGGCGTGTTATGCGCCTTGTTAGTTATCCGGGGTCTCAAACCCGGCA 1211
Query 21340 CTGGATTTTGC 21350
| || |||||
Sbjct 1210 CCTGAATTTGC 1200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133484181644868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |