Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_031081.1 Length=45206 Score E Sequences producing significant alignments: (Bits) Value seq1577 86.0 2e-12 >seq1577 Length=31499 Score = 86.0 bits (94), Expect = 2e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 5406 GCACATAAACACGTCAAGCGCTGGATTAACCTTACCGGCACACCAGCGCCAAACGGGCTA 5465 |||||||| || ||| | |||||| || || |||||||| ||||| |||||||| || Sbjct 18356 GCACATAATCATGTCCACCGCTGGGGCAATCTCACCGGCACGCCAGCACCAAACGGTCTG 18297 Query 5466 AAAGACTTATGGGGTCAGACGTGGTTTGTCGACGGTGGCGAACGCCTCGGCAGTAGCTAT 5525 |||| | ||||| || ||||||||||||| ||| | ||||| || | | || Sbjct 18296 GTAGACCTGTGGGGGCAAGCGTGGTTTGTCGATCAGGGCCAGCGCCTGGGGCGCACATAC 18237 Query 5526 AAGGCATTTACCGACCGCTGGTTCA 5550 ||||||||| |||||||||| Sbjct 18236 GGCGCATTTACCTCGCGCTGGTTCA 18212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144509216157792