Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq3504 170 3e-37 >seq3504 Length=7869 Score = 170 bits (188), Expect = 3e-37 Identities = 181/239 (76%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 201848 GACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAA 201907 ||| | ||||| || || ||| | || ||||||| | ||||||||| || || | ||| Sbjct 7503 GACAGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAA 7562 Query 201908 GAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTG 201967 || |||||||||||||| |||||||| || || || |||||||| || |||||| Sbjct 7563 GACGGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTG 7622 Query 201968 CTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATC 202027 |||||||||||| |||||||||||| | ||| || | ||||| || || | ||| Sbjct 7623 TTGTGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATT 7682 Query 202028 TGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCG 202086 ||||| |||||||| ||| | || || || | || ||||| ||||||||||| ||||| Sbjct 7683 TGGGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCG 7741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787840309888520