Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq3504 230 4e-55 >seq3504 Length=7869 Score = 230 bits (254), Expect = 4e-55 Identities = 238/309 (77%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 196014 ATGAAACAGTATTTGGAATTGATGCACACCGTGTTGAACGAAGGTCACGA-GAAAGCTGA 196072 |||||||||||| ||||||||||||| | ||| | | || || ||| ||| | || Sbjct 7446 ATGAAACAGTATCTGGAATTGATGCAGAAAGTGCTTGATGAGGGA-ACGCCGAAGGGAGA 7504 Query 196073 CCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGCAA 196132 | | |||||||| || ||| | || |||||||| | ||||||||||| | |||| | Sbjct 7505 CAGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAGA 7564 Query 196133 AGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTGTT 196192 || || |||||||| |||||||| | || ||||| || ||||| ||||| ||||| Sbjct 7565 CGGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTGTT 7624 Query 196193 GTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 196252 ||||||||| ||||| ||||||||| | |||||| | ||||| || || || || || Sbjct 7625 GTGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATTTG 7684 Query 196253 GGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCGTGC 196312 |||||| ||||| ||||| ||||||||||||| || || ||||||||||||||||| || Sbjct 7685 GGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCGCGC 7744 Query 196313 ATGGGTTGC 196321 |||| ||| Sbjct 7745 TTGGGGTGC 7753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770147967872920