Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq3504 230 4e-55
>seq3504
Length=7869
Score = 230 bits (254), Expect = 4e-55
Identities = 238/309 (77%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 196014 ATGAAACAGTATTTGGAATTGATGCACACCGTGTTGAACGAAGGTCACGA-GAAAGCTGA 196072
|||||||||||| ||||||||||||| | ||| | | || || ||| ||| | ||
Sbjct 7446 ATGAAACAGTATCTGGAATTGATGCAGAAAGTGCTTGATGAGGGA-ACGCCGAAGGGAGA 7504
Query 196073 CCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGCAA 196132
| | |||||||| || ||| | || |||||||| | ||||||||||| | |||| |
Sbjct 7505 CAGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAGA 7564
Query 196133 AGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTGTT 196192
|| || |||||||| |||||||| | || ||||| || ||||| ||||| |||||
Sbjct 7565 CGGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTGTT 7624
Query 196193 GTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 196252
||||||||| ||||| ||||||||| | |||||| | ||||| || || || || ||
Sbjct 7625 GTGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATTTG 7684
Query 196253 GGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCGTGC 196312
|||||| ||||| ||||| ||||||||||||| || || ||||||||||||||||| ||
Sbjct 7685 GGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCGCGC 7744
Query 196313 ATGGGTTGC 196321
|||| |||
Sbjct 7745 TTGGGGTGC 7753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770147967872920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |