Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq57 170 4e-37 seq504 91.5 3e-13 >seq57 Length=2082711 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | ||||||||||||||| || ||||| || || |||||||| | | || Sbjct 1619987 CTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCAGAAAGGGTG 1620046 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||||||||| |||||| ||||| || | ||| |||||||| | | |||||| Sbjct 1620047 CGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCCT 1620106 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| |||||||| || ||| ||| | || | |||| ||| |||||||||||| Sbjct 1620107 TCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCTACTTCAAGA 1620166 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||||||| || || || |||||||| ||||||| ||||||| Sbjct 1620167 GTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCATT 1620208 Score = 150 bits (166), Expect = 4e-31 Identities = 169/224 (75%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||||||| |||||||| |||||||| ||||| || || || ||||| | | ||| Sbjct 1620899 CTTAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTG 1620958 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | |||||||||| ||||| ||||||||||| | || || ||||| | || |||| Sbjct 1620959 CGGCCATCTTCTAACTGCTTT--CCGGCGAAGATTAATCTTTGTTGGTCTGGCGGAATTC 1621016 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 |||| || ||||||||||| || ||| | || | |||| ||| || ||||||| Sbjct 1621017 CTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAACTTCAA 1621076 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| ||||| || || || ||||| ||||||| ||||||| Sbjct 1621077 GTGTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCATT 1621120 Score = 149 bits (164), Expect = 1e-30 Identities = 168/223 (75%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||||||| |||||||| ||||| || ||||| ||||| || ||||| | | ||| Sbjct 1619303 CTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAGAGAGTG 1619362 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | ||||||||||| ||||| ||||||||||| | ||| || ||||| | | |||| Sbjct 1619363 CGGCCATCTTCTAGCTGCTTT--CCGGCGAAGATTAACCTTTGTTGGTCTGGTGGAATTC 1619420 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 |||| || ||||||||||| || ||| | || | |||| || || ||||||| Sbjct 1619421 CTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAACTTCAA 1619480 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || || || ||||||||||| |||| |||||| Sbjct 1619481 GTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| ||||||||||| | || |||||||| || ||||| ||||| | | ||||| Sbjct 1618850 AGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCAGAAAGAGTTCGA 1618909 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | |||||| ||||| || | ||| ||||| || | | |||||||||| Sbjct 1618910 CCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGAGGGATTCCTTCC 1618969 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || |||||||| || ||| ||| | || | | || ||| |||||||| | ||| Sbjct 1618970 TTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCTACTTCTAAGGTA 1619029 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || | ||| |||||||| | |||||| Sbjct 1619030 ATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067 Score = 132 bits (146), Expect = 1e-25 Identities = 165/224 (74%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||||||| |||||||| |||||||| ||||| || || || ||||| | | ||| Sbjct 1620671 CTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTG 1620730 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | |||||||||| ||||| ||||||||||| | || || ||||| | | |||| Sbjct 1620731 CGGCCATCTTCTAACTGCTTT--CCGGCGAAGATTAATCTTTGTTGGTCGGGTGGAATTC 1620788 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 |||| || || || ||||| || || |||||| | ||||| ||| ||||||| Sbjct 1620789 CTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCTGACGGCTCAACTTCAA 1620848 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||||||||| || || || || || || || | |||||| Sbjct 1620849 GAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCATT 1620892 Score = 131 bits (144), Expect = 4e-25 Identities = 159/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| || ||||| ||||| || |||||||| | || ||||| |||||| Sbjct 1619084 AGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCT 1619143 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || | ||||| || || || ||||| | |||||| || | | |||||||||||| | Sbjct 1619144 TCCAACTGCTTT--CCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTAT 1619201 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || ||||| ||| ||| | || | | || || ||| |||||||||||||| | Sbjct 1619202 CCTGGATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTG 1619261 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||| || || ||||| |||||||| | |||||| Sbjct 1619262 TTTTTCCAGTCAGAGTTTTCACGAAAATTTGCATT 1619296 Score = 129 bits (142), Expect = 1e-24 Identities = 164/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | || || | |||||| || ||||| ||||| || |||||||| | || |||| Sbjct 1619531 CTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTT 1619590 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | |||||||||| ||||| || || || ||||| | |||||| || | | |||| Sbjct 1619591 CGGCCATCTTCTAACTGCTTT--CCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTC 1619648 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 |||| || || || ||||| || || |||||| | || || ||| ||||||| Sbjct 1619649 CTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAA 1619708 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||||||||| || || ||||| ||||| || | |||||| Sbjct 1619709 GAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1619752 Score = 125 bits (138), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| || ||||| ||||| || |||||||| | || ||||| |||||| Sbjct 1620452 AGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCT 1620511 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || | ||||| || || || ||||| | |||||| || | | |||||||||||| | Sbjct 1620512 TCCAACTGCTTT--CCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTAT 1620569 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || ||||| ||| ||| | || | | || || ||| |||||||||||||| | Sbjct 1620570 CCTGGATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTG 1620629 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||| || || ||||| ||||| || | |||||| Sbjct 1620630 TTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1620664 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || ||||| | ||| || || || || || || ||||| | || || | || Sbjct 1618624 TCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGACAAGGTGCGACC 1618683 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | |||||| ||||| || | ||| |||||||| | | ||||||||||| Sbjct 1618684 ATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCCTTCCTT 1618743 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||||| ||| ||| | || | |||| || || |||||||||||||| Sbjct 1618744 GTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCAACTTCAAGAGTAAT 1618803 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || | ||| ||||| || | ||||| Sbjct 1618804 GGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 109 bits (120), Expect = 1e-18 Identities = 161/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||||| || || | ||| | || ||||| || || || |||||||||| || || Sbjct 1621127 CTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGGATAGGGTA 1621186 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | |||||||| | ||||| || || || || | | ||||| || | | ||||| Sbjct 1621187 CGACCATCTTCCAACTGCTTT--CCAGCAAAAATTAATCGTTGCTGATCAGGAGGGATTC 1621244 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 ||||||| ||||||||||| || || | || | | |||||| ||| ||||||| Sbjct 1621245 CTTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAACTTCAA 1621304 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| || || || ||||| | || || ||||||| ||||||||| Sbjct 1621305 GAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCATTTT 1621350 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || || || |||||||| | |||||| ||||| ||||| ||||| || | | ||| Sbjct 1619759 CTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTG 1619818 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| | || || || ||||| | ||||| || || | | || ||| Sbjct 1619819 CGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCT 1619878 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| ||| ||| | |||| |||| || || ||||| | Sbjct 1619879 TCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAG 1619938 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || || || | ||||| || || | ||||||| Sbjct 1619939 GTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCATT 1619980 >seq504 Length=327254 Score = 91.5 bits (100), Expect = 3e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| ||||| |||||||||| | || | ||||||||||| ||| || || || | Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | || ||||| || | | |||||||| || ||||| || ||| || ||| | | Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTT 214223 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | ||||||| || || ||||| ||||| ||||| ||||| | ||| ||||| | Sbjct 214224 CAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAA 214283 Query 152095 AGACCTGCATTTT 152107 | | ||||| || Sbjct 214284 AAATTTGCATATT 214296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153576328088327