Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq57 163 6e-35
seq504 136 8e-27
seq349 86.0 1e-11
seq125 86.0 1e-11
seq75 86.0 1e-11
seq42 86.0 1e-11
seq21 86.0 1e-11
>seq57
Length=2082711
Score = 163 bits (180), Expect = 6e-35
Identities = 152/193 (79%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
|||||| || || ||||| |||| ||| ||||| ||||| |||| |||||||| || ||
Sbjct 1620016 TTCTTTCTGAATATTGTAATCAGAAAGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAA 1620075
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||| |||||| || || || ||||| ||||| ||||| |||||||| |
Sbjct 1620076 AATCAACCTTTGCTGGTCAGGTGGTATTCCTTCCTTATCTTGAATCTTCGCTTTTACATT 1620135
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||| ||||| ||||| || ||||| || || | |||||||||
Sbjct 1620136 TTCAATTGTGTCAGAAGGTTCTACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAAC 1620195
Query 283088 GAATATCTGCATT 283100
||| |||||||||
Sbjct 1620196 GAAGATCTGCATT 1620208
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947
||||| |||||||| || |||||| ||||| |||||||||| || ||||| |||||
Sbjct 1619768 AGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGTGCGACCATCT 1619827
Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007
|| | || || || ||||||||||| | ||||| || |||||||| || || |||
Sbjct 1619828 TCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACCTTCTTTATCT 1619887
Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067
|| || || ||||| || | || || ||||| || | ||| ||||| | || || |||
Sbjct 1619888 TGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAAGGTAATGGTC 1619947
Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| || || || |||||||| ||||||||||||
Sbjct 1619948 TTTCCAGTTAAGGTCTTAACAAATATCTGCATT 1619980
Score = 147 bits (162), Expect = 5e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|| ||||||| | ||||| |||||||| || ||| || || || || || || | |
Sbjct 1618613 CCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGAC 1618672
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| ||||| || | ||||||||| || || ||||| | ||| |||||| ||
Sbjct 1618673 AAG-GTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGG 1618731
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||||||||| || || ||||| || | || |||||||| || | ||| ||
Sbjct 1618732 TATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCAAC 1618791
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||| || || || || |||||||| || || ||||| |||||
Sbjct 1618792 TTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839
Score = 147 bits (162), Expect = 5e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | || ||||| |||| ||| |||||| || || || || ||||| || |
Sbjct 1621121 CCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGGAT 1621180
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || ||||| || | || || || ||||| || || ||||| || ||| ||
Sbjct 1621181 AGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGGG 1621240
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||| ||||| || || || |||||| | || ||||| || |||| || |||
Sbjct 1621241 ATTCCTTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAACT 1621300
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
|| ||||| || ||||| |||||||| || || ||||| ||||||||||||
Sbjct 1621301 TCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCATTTTC 1621351
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947
||||| ||||||| || |||||| || || || || || | ||| |||||||||||
Sbjct 1620908 AGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGGCCATCT 1620967
Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007
|||| || || ||||| ||||| || | ||||||||| |||||| || || || |||
Sbjct 1620968 TCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTGGCGGAATTCCTTCTTTATCT 1621027
Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067
|| || || || || || | ||||| ||||| |||| ||| ||||| || || |||||
Sbjct 1621028 TGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAACTTCAAGTGTAATCGTT 1621087
Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| || || | ||||| ||||| |||||||||
Sbjct 1621088 TTTCCTGTAAGGGTCTTGACGAAGATCTGCATT 1621120
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947
||||| ||||||| || |||||| ||||| || || || | || |||||||||||
Sbjct 1619312 AGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAGAGAGTGCGGCCATCT 1619371
Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007
||||| || || ||||| ||||| || | ||||||||| ||||| || || || |||
Sbjct 1619372 TCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTGGAATTCCTTCTTTATCT 1619431
Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067
|| || || || || || | ||||||||||| || | ||| ||||| || || || |||
Sbjct 1619432 TGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAACTTCAAGTGTAATGGTC 1619491
Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || | |||||| || || ||||||||
Sbjct 1619492 TTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523
Score = 136 bits (150), Expect = 8e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || | ||| || ||||| || || ||||| || ||||| || ||||
Sbjct 1618840 ACCTCCTCGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTATAATCAGA 1618899
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || ||||| || | |||||||| || || ||||| | ||| || || ||
Sbjct 1618900 AAGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCGGGAGG 1618959
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||| ||||| ||||| |||||||| | || || || || |||| ||| ||
Sbjct 1618960 GATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAAGGTTCTAC 1619019
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || ||||| || || || ||||| || ||||||||||||||
Sbjct 1619020 TTCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | || ||||| |||| ||| |||||| ||||| || || ||||| ||||
Sbjct 1620209 CCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGAC 1620268
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| || | || || || ||||||||||| | ||||| || |||
Sbjct 1620269 AGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGA 1620328
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||| || || ||||| || || ||||| || | || || || || || | ||| |||
Sbjct 1620329 ATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTACT 1620388
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| || || || || || || || ||||||||||||||
Sbjct 1620389 TCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435
Score = 123 bits (136), Expect = 5e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947
||||| ||||||| || |||||| || || || || || | ||| |||||||||||
Sbjct 1620680 AGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGGCCATCT 1620739
Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007
|||| || || ||||| ||||| || | ||||||||| ||||| || || || ||
Sbjct 1620740 TCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTGGAATTCCTTCTTTATCC 1620799
Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067
||||| || || |||||| | || || || || || | || ||||| ||||| || ||
Sbjct 1620800 TGGATTTTAGCCTTTACGTTCTCTATTGTATCTGACGGCTCAACTTCAAGAGTAATAGTT 1620859
Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|| || |||| || || || || || ||||||
Sbjct 1620860 TTTCCAGTCAGGGTTTTTACAAAAATTTGCATT 1620892
>seq504
Length=327254
Score = 136 bits (150), Expect = 8e-27
Identities = 146/193 (76%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969
|||| ||||| ||||| || | ||| ||||| ||||| ||||| ||||| || ||||| |
Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163
Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029
|||| | ||| || || ||||| || || || |||||||||||||| || || | |
Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTT 214223
Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
| || ||||| || | ||| || || || || || || |||||||||||||| || || |
Sbjct 214224 CAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAA 214283
Query 283090 ATATCTGCATTTT 283102
| || ||||| ||
Sbjct 214284 AAATTTGCATATT 214296
>seq349
Length=551398
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 349613 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 349557
>seq125
Length=1349911
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 572727 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 572671
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 573642 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 573698
>seq75
Length=1867704
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 935411 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 935355
>seq42
Length=2339945
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 2128019 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 2128075
>seq21
Length=2976947
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1416597 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1416653
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1416877 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1416933
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1417151 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1417207
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1417425 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1417481
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1417700 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1417756
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1418001 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1418057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046517416571198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |