Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq57 105 5e-18
>seq57
Length=2082711
Score = 105 bits (116), Expect = 5e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| ||||||||||| || || || ||||| || || || || || ||||||||
Sbjct 1619977 CATTCCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATC 1620036
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || || | ||| ||||| || || ||||| | ||||| || |
Sbjct 1620037 AGAAAGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGG 1620096
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| || |||||| || | || | || ||||| | | |||
Sbjct 1620097 TGGTATTCCTTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTC 1620156
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| |||||||| || || ||||| |||||||| |||||
Sbjct 1620157 TACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCAT 1620207
Score = 104 bits (114), Expect = 2e-17
Identities = 167/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | || | ||||| ||| ||||||||| || ||||||||
Sbjct 1619065 CATACCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATC 1619124
Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
| ||||| | || | || |||| |||||| || ||||| || | |||||||||||||
Sbjct 1619125 AGATAGAGTTCG-GC-CATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCT 1619182
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGA 44283
| || | |||||||| ||| || || |||| || || | || || || | ||
Sbjct 1619183 GGTGGGATTCCTTCCTTATCCTGGAT-TTTGGCTTTAACATTTTCAATAGTATCAGAGGG 1619241
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | ||||| || ||||| || || || |||||||| ||||||||
Sbjct 1619242 CTCAACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295
Score = 100 bits (110), Expect = 2e-16
Identities = 164/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | | || | ||||| ||| ||||||||| || ||||||||
Sbjct 1620433 CATACCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATC 1620492
Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
| ||||| | || | || |||| |||||| || ||||| || | |||||||||||||
Sbjct 1620493 AGATAGAGTTCG-GC-CATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCT 1620550
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | |||||||| ||| || || || | || | || || || | ||
Sbjct 1620551 GGTGGGATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGC 1620610
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || | ||||| || ||||| || || || ||||| || ||||||||
Sbjct 1620611 TCCACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663
Score = 98.7 bits (108), Expect = 7e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| ||||||||||| | || || || || || || || ||||| || ||
Sbjct 1619290 TTGCATTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATA 1619349
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | ||| ||| | || || |||||||| ||||| ||||| || | || || ||
Sbjct 1619350 ATCTGAGAGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTC 1619409
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | ||||| || || || || ||| | || | || ||||| | |
Sbjct 1619410 TGGTGGAATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGG 1619469
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || | ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 1619470 TTCAACTTCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523
Score = 98.7 bits (108), Expect = 7e-16
Identities = 166/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| |||||||| || | | |||| ||||| ||| ||||||||| || ||||||||
Sbjct 1619521 CATACCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATC 1619580
Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
| ||||| | || | || || | |||||| || ||||| || | |||||||||||||
Sbjct 1619581 AGATAGAGTTCG-GC-CATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCT 1619638
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283
| || | ||||| || ||| || || || | | |||| |||| || || | |
Sbjct 1619639 GGTGGAATTCCTTCTTTATCCTGGAT-TTTAGCCTTTACGTTCTCTATTGTATCAGACGG 1619697
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | ||||| || ||||| || || || ||||| || ||||||||
Sbjct 1619698 CTCAACTTCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751
Score = 98.7 bits (108), Expect = 7e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| ||||| || || | || || || | || || || ||||| |||||
Sbjct 1619746 TTGCATTCCTCCTCTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTA 1619805
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | || ||| | || |||| |||||| || ||||||||||| | ||| |||||
Sbjct 1619806 GTCAGACAGAGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATC 1619865
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | |||||| || || || || |||| || |||| ||||| | |
Sbjct 1619866 TGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGG 1619925
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| || | ||||| |||||||| || | |||||| || || || |||||
Sbjct 1619926 TTCCACTTCTAAGGTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCAT 1619979
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| ||||| || | | |||| || | |||| ||| || || || ||||||||
Sbjct 1620205 CATTCCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATC 1620264
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || |||| |||||| || ||||||||||| | ||| |||||||
Sbjct 1620265 AGACAGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGG 1620324
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||| || || || || |||| || | || || || | | |||
Sbjct 1620325 TGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTC 1620384
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | || || || ||||| || | || || ||||| || |||||
Sbjct 1620385 TACTTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359917845847329
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |