Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq57 167 6e-36
seq504 156 1e-32
>seq57
Length=2082711
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||||||| | |||||||||||||| ||| | || || ||| || ||
Sbjct 1619064 CAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCTGAT 1619005
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| |||||||| || || |||||||||||||| || ||||||
Sbjct 1619004 ACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAGCAA 1618945
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || ||||| || |||||| | |||||||| | |||||| | ||||||||| |
Sbjct 1618944 AGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAACATT 1618885
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| ||||| |||||| |||||||||| | |||||
Sbjct 1618884 CAGAAAGAGTCAACATTGCATCTTGTCCTTAGACT 1618850
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| ||||| |||||||| || || || || || || ||| || |||
Sbjct 1619520 CAGATCTTTGTGAAGACTCTTACAGGAAAGACCATTACACTTGAAGTTGAACCATCTGAC 1619461
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || || ||||| || ||||||||||| || || ||||| |||
Sbjct 1619460 ACTATCGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAACAA 1619401
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | |||||||||||||| ||||| |||||||| | ||||| | |||||||| ||
Sbjct 1619400 AGGTTAATCTTCGCCGGAAAGCAGCTAGAAGATGGCCGCACTCTCTCAGATTATAATATC 1619341
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||||||||||| || |||||||| | ||||| |||
Sbjct 1619340 CAGAAAGAATCAACTCTACATCTTGTACTCAGACTGAGA 1619302
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || ||||| || || |||||||| || || || || || || |||||
Sbjct 1620888 CAAATTTTTGTAAAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCAGAT 1620829
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| || || || ||||| ||||||||||| || || ||||| |||
Sbjct 1620828 ACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCAACAA 1620769
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||||||||| ||| | |||||||| | |||||| | |||||||| |
Sbjct 1620768 AGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAATATT 1620709
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| |||||||| || || |||||||| | ||||| |||
Sbjct 1620708 CAGAAAGAATCTACTCTACATCTTGTACTCAGACTGAGA 1620670
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || |||||||||||||| || || || || ||| || |||
Sbjct 1621116 CAGATCTTCGTCAAGACCCTTACAGGAAAAACGATTACACTTGAAGTTGAACCTTCTGAC 1621057
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || || ||||| || ||||||||||| || || ||||| |||
Sbjct 1621056 ACAATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCGCCAGACCAACAA 1620997
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||||||||| ||| | |||||||| | |||||| | |||||||| |
Sbjct 1620996 AGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAATATT 1620937
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| |||||||| || || |||||||| | ||||| |||
Sbjct 1620936 CAGAAAGAATCTACTCTACATCTTGTACTCAGACTAAGA 1620898
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| |||||||| || || || || || || ||| || |||
Sbjct 1620204 CAGATCTTCGTTAAGACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAACCTTCTGAC 1620145
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| |||||||| || || |||||||| || || |||||||||
Sbjct 1620144 ACAATTGAAAATGTAAAAGCGAAGATTCAAGATAAGGAAGGAATACCACCTGACCAGCAA 1620085
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || ||||| || |||||| | |||||||| | || ||| | ||||| || |
Sbjct 1620084 AGGTTGATTTTCGCTGGGAAACAGTTAGAAGATGGGCGCACCCTTTCTGATTACAATATT 1620025
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||||||||||| || |||||||| || ||||| |||
Sbjct 1620024 CAGAAAGAATCAACTCTTCATCTTGTCTTAAGACTGAGA 1619986
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||||||||| || |||||||| || || || || || || ||| ||
Sbjct 1619292 CAAATTTTCGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTCTGAT 1619233
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || ||||| || ||||||||||| || || |||||
Sbjct 1619232 ACTATTGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAGCAG 1619173
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| || || ||||| ||| | |||||||| | ||||| | ||||| || |
Sbjct 1619172 CGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAATATT 1619113
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
||||| || || || || ||| | |||
Sbjct 1619112 CAAAAGGAGTCCACCCTTCATTTAGTT 1619086
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||||||||| || |||||||| || || || || || || || ||
Sbjct 1619748 CAAATTTTTGTGAAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCTGAT 1619689
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || |||||||| || || || ||||| ||||||||||| || || || |||||
Sbjct 1619688 ACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCAGCAG 1619629
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| || || ||||| ||| | |||||||| | ||||| | ||||| || |
Sbjct 1619628 CGTCTTATTTTTGCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAATATT 1619569
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || || ||| | ||| | | ||||||
Sbjct 1619568 CAAAAGGAGTCCACCCTTCATTTGGTTCTTCGGCTCAGA 1619530
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||||||||| || |||||||| || || || || ||||| ||| ||
Sbjct 1620660 CAAATTTTTGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTCTGAT 1620601
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || ||||| || ||||||||||| || || |||||
Sbjct 1620600 ACTATTGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAGCAG 1620541
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| || || ||||| ||| | |||||||| | ||||| | ||||| || |
Sbjct 1620540 CGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAATATT 1620481
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
||||| || || || || ||| | |||
Sbjct 1620480 CAAAAGGAGTCCACCCTTCATTTAGTT 1620454
Score = 113 bits (124), Expect = 1e-19
Identities = 162/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || ||||| ||||| | || || || || || || || || || ||
Sbjct 1621350 AAAATGC---AGATCTTCGTAAAAACGTTGACGGGGAAGACAATAACTCTTGAAGTTGAG 1621294
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||||| || || || ||||| || || ||||| || || ||||||||||||||
Sbjct 1621293 CCTTCAGATACTATTGAAAACGTAAAGGCTAAAATTCAAGATAAGGAAGGAATCCCTCCT 1621234
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||||||| | || || || ||||| ||| | |||||||| | || || |||||
Sbjct 1621233 GATCAGCAACGATTAATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGTACCCTATCCGAT 1621174
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || | || || || || || ||||| | ||| | ||||||||
Sbjct 1621173 TACAATATACAGAAGGAGTCCACGTTGCATTTGGTTCTTCGACTCAGA 1621126
>seq504
Length=327254
Score = 156 bits (172), Expect = 1e-32
Identities = 154/198 (78%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 177913 TTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGG 177972
||||||| | |||||||| ||||||||| | || || ||||| || ||||| ||||| |
Sbjct 214300 TTAAAATA-TGCAAATTTTTGTGAAAACTTTGACGGGTAAAACAATTACCCTTGAGGTTG 214242
Query 177973 AAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
|| ||||||||| || || || || || |||||| || || ||||||||||| ||||
Sbjct 214241 AACCCTCAGACACAATTGAAAATGTTAAGGCAAAGATCCAAGATAAAGAAGGAATTCCTC 214182
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| || |||||| || | || || || || |||||||| ||||||||| | || ||| |||
Sbjct 214181 CAGATCAGCAAAGATTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACCCTTTCCG 214122
Query 178093 ATTATAACGTCCAAAAAG 178110
|||| || |||| ||||
Sbjct 214121 ATTACAATATCCAGAAAG 214104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203476153057178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |