Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq285309 118 6e-22 >seq285309 Length=1797 Score = 118 bits (130), Expect = 6e-22 Identities = 191/273 (70%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 3873 AAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGC 3932 ||||||| ||||| | |||||||| || || || || ||||| || ||||||||||| | Sbjct 262 AAGGTGTGCATTTCGTTATGGCTGATGGGGGCTTTTCAGTTGAAGGCCAAGAAAATATAC 321 Query 3933 AAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATAC 3992 ||||||| ||||| ||| | | || | ||||| || | | ||||| | || | | Sbjct 322 AAGAAATTTTATCTAAACAACTATACCTTTGTCAGTGCCTGACAGCATTAAAAATTCTTC 381 Query 3993 GAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTT 4052 | || ||| || ||| ||| |||| ||||| ||||||||||||||| ||| Sbjct 382 GCTTTAATGGAAGTTTTGTGTGTAAACTTTTTGATATTTTTACACCTTTTAGTATTGGCC 441 Query 4053 TAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATC-- 4110 | || ||| | |||||| | |||| | || ||| |||||||| | || | Sbjct 442 TTGTATATCTCATGTATCAGTGTTTTGAAGAAATGACAATTATCAAACCAAA--CAGCAG 499 Query 4111 GCGACCGGCCAATTCTGAAAGATATTTGGTGTG 4143 ||||| || ||||| |||||||| ||||| || Sbjct 500 TCGACCCGCAAATTCAGAAAGATACTTGGTTTG 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275584834899775