Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq287342 93.3 5e-14 >seq287342 Length=4947 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 168471 TCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTTG 168530 || |||||||| | | ||| ||||| |||||||| | || || || | ||||| || Sbjct 2758 TCTTTACCACCTGTTAAACGGGTACCGAATTGACCTCTAGGCTCGAGTAAATTAATATTA 2699 Query 168531 TTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATACTTCACCA 168590 |||||||| ||| | | ||||| |||||||| || ||| || ||||||||| Sbjct 2698 TTTGAACCAACGTAATTCTGGGCCAAATTAACAATAGTCATTTGTAAAGAAACTTCACCA 2639 Query 168591 TGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTC 168646 || ||||| | |||| | ||||| ||| | | | ||||| |||||||| | ||| Sbjct 2638 TGATGGTATGAAGACATTTCCGCCACAGAACCTGAAAGTTGCGCCACCTTTACTTC 2583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587861109607000