Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq282627 96.9 6e-15 >seq282627 Length=1296 Score = 96.9 bits (106), Expect = 6e-15 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTC 222013 ||||||||||| || | | || | ||| || ||||| || ||||||||| | | | Sbjct 1271 TCAAACTTTTCGCCCCATACATCATGCAGACCAGGACATTTGTGGGGACACATTAAAGAC 1212 Query 222014 CAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073 || | || || | || || | ||| || || || || ||||| || || | || Sbjct 1211 CAATCACCATTTTCCTCAACTCTTTTCATAAATAGATCTGGTATCCATAGAGCGTAGAAA 1152 Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133 |||||||| | || | || ||| ||| | |||||| | | || ||||| |||||| Sbjct 1151 AGATCTCTAGCGCGATTTTCTTCCTTGCCAGTATTTTTCTTTAAGTCTAAAAATTCAAAA 1092 Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCC 222193 || || | ||||| ||||||| ||||||||| | ||| || || || || |||||| Sbjct 1091 ATATCCGAATGCCAAGGCTCCAAATAGACGGCAAAAGCACCAGGACGTTTACCACCACCC 1032 Query 222194 TGATCCAC 222201 || || || Sbjct 1031 TGGTCGAC 1024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 925507634792000