Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq287342 93.3 5e-14 >seq287342 Length=4947 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 14426 GAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACCATGGT 14485 ||| | |||||||| ||||| | | | ||| ||||| | |||| | ||||| |||||| Sbjct 2583 GAAGTAAAGGTGGCGCAACTTTCAGGTTCTGTGGCGGAAATGTCTTCATACCATCATGGT 2642 Query 14486 GAAGTATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGGGTTCAAACAAC 14545 ||||| || ||| || |||||||| ||||| | | ||| |||||||| || Sbjct 2643 GAAGTTTCTTTACAAATGACTATTGTTAATTTGGCCCAGAATTACGTTGGTTCAAATAAT 2702 Query 14546 ATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTGGTAAGGA 14601 ||||| | || || || | |||||||| ||||| ||| | | |||||||| || Sbjct 2703 ATTAATTTACTCGAGCCTAGAGGTCAATTCGGTACCCGTTTAACAGGTGGTAAAGA 2758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594426237284000