Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq282627 84.2 2e-11 >seq282627 Length=1296 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 137796 TTTAAATTTTTCGCCCATAACAATCGTT-AGACCCGGACACTCGTCGGGACACATCAACG 137854 || ||| ||||||||| ||| || | ||||| ||||| | || ||||||||| || | Sbjct 1272 TTCAAACTTTTCGCCCCATACA-TCATGCAGACCAGGACATTTGTGGGGACACATTAAAG 1214 Query 137855 ACCATTTTCCTCCCGTCCT-AACCCTTTCCATGAACAGAGAAGGCGTCCATATAGCAAAA 137913 |||| | || |||| ||| |||| ||| || ||| || |||||| ||| | Sbjct 1213 ACCAATCACCATTT-TCCTCAACTCTTTTCATAAATAGATCTGGTATCCATAGAGCGTAG 1155 Query 137914 AGAAGGTCGCGAGCCTTCATATCTTCGGCGCCCATATTGCGTTTTAAATCCaaaaaagta 137973 | ||| || | ||| | ||||| ||| |||| ||||| || ||||| | Sbjct 1154 AAAAGATCTCTAGCGCGATTTTCTTCCTTGCCAGTATTTTTCTTTAAGTCTAAAAATTCA 1095 Query 137974 aaaaTATCAGCATGCCAAGGCTCGATATAGACGGCCATAGCTCC 138017 |||||||| | |||||||||||| | ||||||||| | ||| || Sbjct 1094 AAAATATCCGAATGCCAAGGCTCCAAATAGACGGCAAAAGCACC 1051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443495259276000