Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq282627 149 5e-31 >seq282627 Length=1296 Score = 149 bits (164), Expect = 5e-31 Identities = 250/361 (69%), Gaps = 3/361 (1%) Strand=Plus/Minus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 ||||||| | ||||||||||| ||||| | || || | ||||||| |||||||| Sbjct 1238 GGACATTTGTGGGGACACATTAAAGACCAATCACCATTTTCCTCAACTCTTTTCATAAAT 1179 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 | ||| || | ||||| ||||| || ||||||||||| || ||||| | || || Sbjct 1178 AGATCTGGTATCCATAGAGCGTAGAAAAGATCTCTAGCGCGATTTTCTTCCTTGCCAGTA 1119 Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782 |||| || || | |||||| || ||||| |||| |||||| || |||||||| || || Sbjct 1118 TTTTTCTTTAAGTCTAAAAATTCAAAAATATCCGAATGCCAAGGCTCCAAATAGACGGCA 1059 Query 131783 ATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839 | || || || || ||| || || | |||| | ||| || ||| | || Sbjct 1058 AAAGCACCAGGACGTTTACCACCACCCTGGTCGACATATCTGGCCACATTATTGAACACT 999 Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899 | |||||||||| ||||||| || | | ||||| |||| | ||| | |||| ||| Sbjct 998 CTCAACATGGGCACCAAACCATTCGAAGTGCCATTAGTGCCATCAATAGAAGTGCCTTTG 939 Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCAT 131959 || | || ||||| |||| |||||||| ||| | |||| || || | || ||| Sbjct 938 GCGCGTATACAATGAACATTGATGCCAATACCGCCGGCTGATTTGGAAATCATAGCACAT 879 Query 131960 T 131960 | Sbjct 878 T 878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423445858116600