Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq287342 89.7 6e-13 >seq287342 Length=4947 Score = 89.7 bits (98), Expect = 6e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 179065 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTG 179124 ||||| ||||| | | ||| || || |||||||| | ||||| || | ||| ||||| Sbjct 2758 TCTTTACCACCTGTTAAACGGGTACCGAATTGACCTCTAGGCTCGAGTAAATTAATATTA 2699 Query 179125 TTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCACC 179183 |||||||| | ||| | | |||||| || ||||| || || | | | | |||||||| Sbjct 2698 TTTGAACCAACGTAATTCTGGGCCAAATTAACAATAGTCATTTGTAAAGAA-ACTTCACC 2640 Query 179184 GTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTT 179234 |||||||| | ||| | ||||||||| | | | | ||||||||||| Sbjct 2639 ATGATGGTATGAAGACATTTCCGCCACAGAACCTGAAAGTTGCGCCACCTT 2589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 616213278283000