Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq282627 86.0 7e-12 >seq282627 Length=1296 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 104699 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 104758 ||||| |||| |||||| ||||| |||||||| || ||||| ||||||||||| | ||| Sbjct 1147 GATCTTTTCTACGCTCTATGGATACCAGATCTATTTATGAAAAGAGTTGAGGAAAATGGT 1206 Query 104759 AATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAG 104818 |||||||| | | ||||| |||| |||||||| |||| ||| || || Sbjct 1207 GATTGGTCTTTAATGTGTCCCCACAAATGTCCTGGTCTGCATGATGTATGGGGCGAAAAG 1266 Query 104819 TTTGAAG 104825 ||||||| Sbjct 1267 TTTGAAG 1273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581165253307000