Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq234153 120 3e-22 >seq234153 Length=1300 Score = 120 bits (132), Expect = 3e-22 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 27434 GCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAA 27493 |||||||||||| |||||||||||| | ||||| | | | |||| | | || || | Sbjct 425 GCAAGACTATTATTCTTGAGGTTGAAACCTCTGATACCTTCGAAAATGTTTAAGCCAAGA 484 Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||| |||| ||||||||||| ||||||||||||||| |||||||||||||||| || Sbjct 485 TTCAGAACAAAGAGGGAATTCCACCAGACCAGCAGCGTTTAATTTTTGCTGGTAAACAGT 544 Query 27554 TCGAGGATG 27562 | || |||| Sbjct 545 TGGAAGATG 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568261381666000