Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophagidae_20sp._20BV-2014_20[genbank_20GCA_5F001047195.1_202015- 07-06] 287,425 sequences; 494,580,772 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq285928 118 9e-22 >seq285928 Length=2047 Score = 118 bits (130), Expect = 9e-22 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 135505 AGAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTC 135564 |||||| ||||||||||| ||| | || ||||||||||| |||||||||||||||||| | Sbjct 819 AGAAGGAAAAATGCACGGTTTTTTACGTATGTATTGGGCTAAAAAGATATTGGAATGGAC 878 Query 135565 TGCATCGCCTGCAGAGGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGA 135624 | ||| || | | |||| | || ||| || || |||||||| | || |||||||| Sbjct 879 AGAATCTCCAGAACAGGCTTTGGAATTCGCCATTTTACTTAATGATAAGTATAGTTTAGA 938 Query 135625 TGGACGCGATTCAAATGGCTACGTAGGT 135652 ||| | ||| ||||||| || || ||| Sbjct 939 TGGTAGAGATCCAAATGGTTATGTGGGT 966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433398073033025