Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcoptes_20scabiei_20[genbank_20GCA_5F000828355.1_202015-02-10]
18,860 sequences; 56,262,437 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq6148 105 5e-18
>seq6148
Length=42148
Score = 105 bits (116), Expect = 5e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
||||| ||||||| | ||| | | ||| | || || || || ||||| || |||||
Sbjct 25623 TTCCAGGCACACAAAATCATTCGACGATCATTTGGATTCGTCTTAATAGTTTCGATCAAT 25564
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC-GCGCCCAA--CACCTTTATATTCT 102043
| || ||| || || |||| ||| | |||||| ||| | || | |||||||
Sbjct 25563 TTAGATAGTTGATCGACACCTTGTCCCTCATAATCAGCGTTCTTGTCAAC---ATATTCT 25507
Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103
|| |||||||| | ||| ||||| ||||| || ||||| ||||||||||| ||||| ||
Sbjct 25506 GCACCGAAATGGCGCCATTGAAAGCCATAAACTGGTCCGAGATCTCCTTCTTCTCTATCG 25447
Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAAT 102153
| || ||||| ||| | |||| ||| || || || || ||||| ||
Sbjct 25446 TTGAAGCCAAGAGAATCGAGAAATTCTCTCGAACCGTTTGCGTCCCATAT 25397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361168164153860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |