Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcoptes_20scabiei_20[genbank_20GCA_5F000828355.1_202015-02-10]
18,860 sequences; 56,262,437 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq9425 91.5 2e-13
seq17802 82.4 8e-11
>seq9425
Length=8889
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| |||||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 2376 AAAAAAATTCTCCGCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2435
Query 57058 TCACCACTATACTACCGAGGATT 57080
| |||||||||||| || |||||
Sbjct 2436 TTACCACTATACTAACGCGGATT 2458
>seq17802
Length=17061
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 4563 CTCCGCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 4622
Query 57067 TACTACCGAGGAT 57079
||||| || ||||
Sbjct 4623 TACTAACGCGGAT 4635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543084737582400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |