Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcoptes_20scabiei_20[genbank_20GCA_5F000828355.1_202015-02-10]
18,860 sequences; 56,262,437 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq4298 100 3e-16
>seq4298
Length=5336
Score = 100 bits (110), Expect = 3e-16
Identities = 119/159 (75%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAA-GCAAAGTCC 119554
||||| || |||||| |||||||| || ||||| | ||||||||||| | ||| ||
Sbjct 1992 GCAAAATCACAATGAAGTCCTTCATCACGCGAGATCAATTCATTACTGAAAGTCAAG-CC 1934
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
|||||| ||||||| ||| || ||||||||||| || ||| ||||| || |||||
Sbjct 1933 AGGCATCAGTCCTCGTTTTTTAAGCCAAAAGATAGCCGCAAACGAGCCAGAGAAAAAGAT 1874
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653
|| || || ||||| || | ||||| ||||||||
Sbjct 1873 TCCTTCGACGGCAGCGAACGCAACAAGACGTTCAGCAAA 1835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588837148908000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |